SimpleSearch - Line and FST details
Line specific information
| Line ID | 136B02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N412974) |
| Segregation Analysis | 50:24:22 |
| Confirmed for Hit | At2g20800 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3744, 3754, 3834 |
Gene hit At2g20800
| Sequence (A. th genome BLAST matches underlined) | >10-K012754-022-136-B02-8409 TGATCCATGTAGATTTCCCGGACTGAAGCACTTTACNTTGAATATCTCTGGACTGTGGGA TACCTCCCTATAGATAGAGGCGTATTACTCACCATCAAGCTTCATTAACTTTGGCTAAAT CTACTGCTTTTCCAATGTTGGTTCAATTCTACTTCAGGTTTGACAAGAGAATCACTGCTT TTGCTGAGGAAAAGTTCCAGCGAGATGGTATTGATCTGAAGACAGGTTCAATGGTTGTGG GAGTGACTGCTGATGAGATATCCACAAAGGAAAGAGAAACTGGCAAGATTGTCTCCGAAC CTTATGGTATGGTTGTGTGGTCAACAGGAATTGGTTCACGTCCTGTCATCAAAGACTTTA TGCAGCAGATTGGTCAGGTTAGATTACACTTGATCACATGAAGAAATCATTTGACTAACC AAATCATTTGCTATGGGATCCTCCCTATAGTGAGTCGTTTTAACTCAANNNNNNNNCNNN NGGNGACNCNNNGNCAGAAGAGANNGAAAAGGAGNAAGNNAGGAGGAGAGACCACCTCGA CCGTATAGGTGGGGGTTGGTCAGCTACTTCAGAAGCTGTAGCCGGTTCATCCACTGGCCA AAACAAGCCACCTCTCCTTTCCTATTGGGGTGGCCTCTGGACGCAGGATACGATCGGGCC GGCAAACCCGCTCAAAAGGGATTGCAGCCTAAATCCCCCGGTAAGCCCCACGCGCCCGTG GAAACCAGNAGGCAAAGGCCCCCACCCGCAATTTTTCTCCACCGCCGTCGC |
| GenBank Accession | AL765188 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:8954526 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F5H14 |
| Hit Gene Code | At2g20800 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NAD(P)H dehydrogenase B4 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit K15I22
| Sequence (A. th genome BLAST matches underlined) | >10-K012801-022-136-B02-35St TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTACACTATGCTCGTCTAAGACCATGTGTACGCTCAATGTTAAAAAATGGTACCATTT CCTTGCAAAAACTCAGCTGTTTCAGAAAAGATTTCAAAAGCTATGGGATCCTCCCTATAG TGAGTCGTATTACTCAGACATGTACGACCCGTTGTTATAAAATGAAAGTACATTTTGATA AAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAAT TCGGAAATCTTTATTTCGACGTGTCTACATTCACGTCCAAATGGGGGCTTAGATGAGAAA CTTCACGATCGATGCCTTGATTTCGGCATTCCCAGATACCCATTTCATCTTCAGATTGGT CTGAGATTATGCGAAAATTACACTCATATGCCTAAATCCTGACAGTTTCGGCCTCCCATC TCATGTAGCCCATTACCTTACATAATTCACTCAAAAGCTA |
| GenBank Accession | FR804030 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:18646385 - go to primer design |
| BLAST e Value | 6e-31 |
| Hit Clone Code (BAC ID) | K15I22 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
