SimpleSearch - Line and FST details
Line specific information
| Line ID | 136C11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N412995) |
| Segregation Analysis | 50:44:44 |
| Confirmed for Hit | At1g18690 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 93473, 93474, 93475, 93476, 95732, 95738, 95743, 95748, 95749, 95750, 95751 |
Gene hit At1g18690
| Sequence (A. th genome BLAST matches underlined) | >83-K012754-022-136-C11-8409 TTGATCCATGGTAGATTTCCCGGGACATGAAGCCTGTACATGATTACTCGGGTGCAGTAG CTTACAGGTCTGATCTGCGGAGATGGAATTTGAGACCACTCCCATCCGCAATTCTTTCTA TACTTAAGAATCAATCCACCCATTCGTATGTACTTTAGACCATCACTATGGGATCCTCCC TATATGCGAGTCTATTATCTCAAGGAGTCTACGGTAATCAATCTTGTTCTTCACAGCTTT CAATAGATAATAGTTTCCAATTGGTTTATCACAGGGTCCGGGGGAAGACCCTGTGAGAAG CAATATTCGAGCTTTGCCATTGACAATATTAGGAAACTCAGGGTTCTGATTCAGCCATAC CTTGCGTTGACTATCCCAGTTGGTGATTTTGGGCCCTATGGGATCCTCCCTATAGTGAGT CGTTTNACTC |
| GenBank Accession | AL765207 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:6436027 - go to primer design |
| BLAST e Value | 9e-104 |
| Hit Clone Code (BAC ID) | F6A14 |
| Hit Gene Code | At1g18690 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Galactosyl transferase GMA12/MNN10 family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g40910
| Sequence (A. th genome BLAST matches underlined) | >83-K012801-022-136-C11-35St TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGAAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCAGTGTATTTGTCGTTACGGAAGAAAAATGGGAAAAAATCGCGAAGCTT GAGAACACATATATATGCATAGTGAAATCGGGAGATTGATGTTCCCTGAAGGATGCTCGA GAAGTAGCTGAATCAATCTCTATGGGATCCATCCCTATGGTGAGTCGTTTCACTCATGAA TTTGATGTAGATATTTATTTAGGAAAGATAACTCAATTAATTTAAAAGAGTTTAATGACA AAATTATTAATAGAATTTTAATAATATTTTAAAATTTGAACTATGGGATCCTCCCTATAG TGAGTCGTTTNACTC |
| GenBank Accession | AL765208 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:16394498 - go to primer design |
| BLAST e Value | 4e-50 |
| Hit Clone Code (BAC ID) | MHK7 |
| Hit Gene Code | At5g40910 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Disease resistance protein (TIR-NBS-LRR class) family |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
