SimpleSearch - Line and FST details


Line specific information

 
Line ID 137C04
Vector Used pAC161
Line Availability available as T3 set from NASC (N413084)
Segregation Analysis 100:72:68
Confirmed for Hit At4g23900
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g18570

 
Sequence (A. th genome BLAST matches underlined) 
>27-K012753-022-137-C04-8409
GTTGGTATAGAATCTTCCAATAGGTTCACATTTTTGAGGTCCCTGTTTGCACATCACTCT
TCTCAGTCCTCACGCATCGTATCAGAGAAAATGACGCTCCCAAATCTGCAGATCTGCTTC
TATGGGATCCTCCCTATAGTGAGTCGATTTACTCAACCCGGGGCCCCCCCCGACCGGGGG
GCATTTACGACATCGCTGTCATCCTCGGGAAGAAACCGCGTAAGTTCTTTCATGACGCGC
AGTGTTTTCAACACAAGACTCCTCCAACATCATGAGATCTTCATCATTCAAAAATGCGGA
GAACCCGATAGTATCCTCATCATCGACGGTGATATTACCAGCGAGATTATCGCAGTACAT
TAGAGGATTGTTAACGGAGGAATCATAGCACGTGGACGAAGAACACGTCAGATTTACGGC
ACCATCAACGTCAAAGTTCGATGAAACTGGTGCTGTTGCCACGGACCCATGGGAGACAAT
ATTCGAGGGTGGTGGCAAAGGAACAACTCGTTGACCTAACTGGATCAGAGTCAACGGAAA
CACTTG
GenBank Accession BX649712 [GenBank]
Graphic View Graphic view of gene At1g18570
Predicted Position of Insertion Chr1:6391186 - go to primer design
BLAST e Value 4e-121
Hit Clone Code (BAC ID) F25I16
Hit Gene Code At1g18570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation myb domain protein 51
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At4g23900

 
Sequence (A. th genome BLAST matches underlined) 
>27-K012802-022-137-C04-35St
ATGACGTAAGGGGATGACGCACAATCCCACTATCCTTCGCAAGACCCTTCCTCTATATAA
GGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCC
TTCGGTTTAAACTATCAGTGTTTCTATCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAG
AGCTACCAACTCTTTTTACGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTG
TTCTTCTATGGGATCCTACCTATAGTGAGTCTTTTTACTCATTCTGGAGCTTGGACTGAT
CCATTTGACTACCTTTCTTATGGGTCAGACTTGTAGGCGAAGCGCATAACCGACTACCAC
TAATCAACCTATAACCATACAAAACGCGCGAACTCATTGCGTTCAAATGCTGCGGGATAT
GATAACAACACTATGTGTGCCAAGATGTATATCGTATCCGGATCACCTGTGTATTATAGG
AGCGTGATCACTCAAATCTTAAACCTTGACGGGT
GenBank Accession FR804058 [GenBank]
Graphic View Graphic view of gene At4g23900
Predicted Position of Insertion Chr4:12424144 - go to primer design
BLAST e Value 4e-41
Hit Clone Code (BAC ID) T32A16
Hit Gene Code At4g23900 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pleckstrin homology (PH) domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences


Last Updated on 10.06.2021 13:37