SimpleSearch - Line and FST details
Line specific information
| Line ID | 138D02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N413190) |
| Segregation Analysis | 50:42:33 |
| Confirmed for Hit | At5g64070 |
| Parent of DUPLO pair | 11959 |
| Parent of pair(s) | none |
Gene hit At5g64070
| Sequence (A. th genome BLAST matches underlined) | >12-K012803-022-138-D02-35St NTTTTGGCGTAAGGGATGACGCACAATCCACTATCCTTCGCAAGACCCTTCCTCTATATA AGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGC CTTCGGTTTAAACTATCAGTGTTTGATGGTGAGAAATGAGTTGCACAGCAAGATGTATTG CGAGAAATGAGTTGCACAGTGAGATGCTCCTGCCTACAGTCGCCACCGCTCTTCACAATG ATCTGCAAAAATCTATGGGATCCTCCCTATAGTGAGCGTTTTTACTCATATGACGACACA TTACGATCCGTCGTATTAATAGGCGAAAGCATTTGCCAAAGCATTCTAATTCGGAAATTT ATATTGAGACGTGTATACATACACGTCCAAATGGGCGCTCACATGAGAAACTTGACGATA GATGCCTTGATTTCGACCTTCCCATATACCCATCCAATCTCCAAATTGGTCTGAGATTAT GCGTAGATATACACTCATATACATAAATACTGACATATAGACCTACCATTTCAGTGTGCC CTATTACCTTACATAATTCACTCAAATGCTA |
| GenBank Accession | AL765361 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:25639354 - go to primer design |
| BLAST e Value | 8e-27 |
| Hit Clone Code (BAC ID) | MHJ24 |
| Hit Gene Code | At5g64070 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | phosphatidylinositol 4-OH kinase beta1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At1g31600
| Sequence (A. th genome BLAST matches underlined) | >12-K012752-022-138-D02-8409 ATGAAAACAACGATAGACTTTTACTTGAGTTAGAAGTGTCAATTGGGCTGTCCAAAGTCC AATGGTCTTGTCCACTTGGAACATTTTTTTCATGGGTTCTAATGGTTGGTCCTTAATGGA CAATGGTGCTGAAAATTTGTCCAAGACCATTAAGGACCATTGTCCAATGGTCAGCCCATG GCCAGCCCATACAATGATGTTTATATACAATGCATTTTCACACAATCTCGTTAAAAGCTC TATTTATAACACCATAACATCAACATGAAATGAAGTAATCAACAGTGACAACTCAAACAT GCATCTAAGACTCTCTATATGCACCTACAAGTAAAGAAAAGAGACTACAATGGCTACAGG GAGAATGATTTAACAGAGAAACCCACACAAAAAAAAAGATGACTTGGTGAACTATGGGAT CCTCCCTATAGTGAGTC |
| GenBank Accession | AL765360 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:11315012 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T8E3 |
| Hit Gene Code | At1g31600 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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