SimpleSearch - Line and FST details


Line specific information

 
Line ID 138E01
Vector Used pAC161
Line Availability available as T3 set from NASC (N413201)
Segregation Analysis 50:12:6
Confirmed for Hit At5g03180
Parent of DUPLO pair none
Parent of pair(s) 41567

Gene hit At5g03180

 
Sequence (A. th genome BLAST matches underlined) 
>05-K012752-022-138-E01-8409
TTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATATCCTTACAGC
GGAATGCGGTGCTTTCGCGTTCAGTGTGTTACTACACAGTTTCGAGGACACTGTGTAATG
ATCACACATGTTCCTTTCTTTGTTGCCCTACGAGAATCCTCTCTATGGGGAACATGTCTA
TGATAGACTCCTCTTACTTATCATTAACTTGTGTGTAGGTGAAGCAGCCGGTAATGTGCA
TTGTCTTAGCCACTATGATCGGATTTGGACTCACCATGACCGGCACAACAGCTATTAACG
AGTATTTGAAATGGAGGAGAAGCAATTCCCACCTGCCAGAAGAGCCAGCAAGTACTCAGG
TGGTTTGACAGCAGCGTAGATCTTTTGAGTGAAGCTATGGGATCCTCCCTATAGTGAGTC
GATTTACCTCAANCCGNNNCGNCCTTGTGCCTGTTCTCGTCTACACTTACTACGGATCAT
CACTCAAAATGTCGGCTCCATTTCTTATAGGTTCTAAAGCAACCTCAGAGCTAAAAGAGC
CCACTGATATGAGCTTTCCCTTCATCTATGGCATGACCGAAACAACTCTTTAAACCGGAA
ACAGGCTATCTATCTCTTCTTGACTA
GenBank Accession AL765369 [GenBank]
Graphic View Graphic view of gene At5g03180
Predicted Position of Insertion Chr5:754510 - go to primer design
BLAST e Value 2e-107
Hit Clone Code (BAC ID) F15A17
Hit Gene Code At5g03180 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37