SimpleSearch - Line and FST details


Line specific information

 
Line ID 139D12
Vector Used pAC161
Line Availability available as T3 set from NASC (N413296)
Segregation Analysis 50:31:19
Confirmed for Hit At5g57200
Parent of DUPLO pair none
Parent of pair(s) 3295, 96691

Gene hit At5g57200

 
Sequence (A. th genome BLAST matches underlined) 
>92-K012875-022-139-D12-8409
TTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGACTCAAGTCCTCTTGC
TGAATAAGAGCAGATTCTTTATCTTGATATATGCGGATGTTTCCAGTTCTTGTAAACTGG
ACCCCTTCATTATATTTGTTTCTTGATGCAGCGTGGGATTGTTCTGCTTGGGTTAGAACA
TACGCGCTCTTTCTATGGGATCCTCCCTATAGTGAGTCGTTNTACTCATGGNTGGAACGT
CTTCTTTTTCCACGATGCTCCTCGTGGGTGGGGGTCCATCTTTGGGACCACTGTCGGCAG
AGGCATCTTCAACGATGGCCTTTCCTTTATCGCAATGATGGCATTTGTAGGAGCCACCTT
CCTTTTCCACTATCTTCACAATAAAGTGACAGATAGCTGGGCAATGGAATCCGAGGAGGT
TTCCGGATATTACCCTTTGTTGAAAAGTCTCAATTGCCCTTTGGTCTTCTGAGACTGTAT
CTTTGATATTTTTGGAGTAGACAAGCGTGTCGTGCTCCACCATGTTGACGAAGATTTTCT
TCTTGTCATTTGAATCGAAGATACTCCTGTTTATACAGTCCGCCAGGCTTTACGGGGAGT
TCTGGGAAGGTCCTCTATTTAAATCTTTGGCTCGCTGGGAATGGGGGGTCCTCTA
GenBank Accession AL765457 [GenBank]
Graphic View Graphic view of gene At5g57200
Predicted Position of Insertion Chr5:23178368 - go to primer design
BLAST e Value 2e-43
Hit Clone Code (BAC ID) MUL3
Hit Gene Code At5g57200 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ENTH/ANTH/VHS superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37