SimpleSearch - Line and FST details


Line specific information

 
Line ID 140B11
Vector Used pAC161
Line Availability available as T3 set from NASC (N413367)
Segregation Analysis 100:89:73
Confirmed for Hit At2g36590
Parent of DUPLO pair none
Parent of pair(s) 3229, 9702

Gene hit At2g36590

 
Sequence (A. th genome BLAST matches underlined) 
>82-K012876-022-140-B11-8409
TTGATCCATGTAGATTNTCCCGGACATGAANGCACTTTACTTATGAGCCTCACTGGTGCA
GTGAGCACATTCCCCCTTACATTCATTCTATGGGATCCTCCCTATAGTGAGTCGTATTAC
TGCATGTCCATGTACTCATATGTTGGACTTGCAAAAATCTACAAAAATTGAGTAAGAACG
GATTGACTAACACATAATTCTTTTCTCGAAGAGAAACTTACGTGCAACGAGATAACGGAT
TGAAGGATAGCGGAGATGTTAGCAAGGGCTTTAACCCAAAGTGGACCATTAACGTTGTTT
AGTAGATAGGGCGAGGTCGAGGATCCGTAAGCCCAATACCCGATGAATACAACCGCAAAC
ATCGGTAAAACACCCACCGTGAATTGAAAGTATAGAGCCTTCATCATGTTTTTTACTACT
GGTTGCTTTACTGTTGCCTATCAATATCATGACGGAAAAAGCAGTGTAGATTAGAAGGAT
TGTCAAGCAGTGTAGTAAAATACACACACTAAACCTTTGAAGCCTAAAACATGAAGCTAA
AAATCTCGAAAAAAAAGAAATCACCTGAATTTCTGGAAGCATCCCTGTGTTGAATACGAA
AACTATGGGATCCTCCCTATAGTGAGTCGTTTTACT
GenBank Accession BX546546 [GenBank]
Graphic View Graphic view of gene At2g36590
Predicted Position of Insertion Chr2:15343400 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F1O11
Hit Gene Code At2g36590 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation proline transporter 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37