SimpleSearch - Line and FST details


Line specific information

 
Line ID 140F01
Vector Used pAC161
Line Availability available as T3 set from NASC (N413405)
Segregation Analysis 50:32:27
Confirmed for Hit At1g47271
Parent of DUPLO pair 11915
Parent of pair(s) none

Gene hit At1g47271

 
Sequence (A. th genome BLAST matches underlined) 
>06-K012893-022-140-F01-35St
NAATCNGACGTAAGGGATCGACGCTCAATCCACTATCCTTCGCAAGACCCTTCCTCTATA
TAAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCC
AGCCTTGGGCTATAACCCATATTAGTAAATAAGACGTGATTAATTGCCACATTCGGTGCA
GTGTACTGCCTATATGTAATGCAGTGTAATGTGACATGTATACACGGATGTATATGTGCA
ATAGTAAATTAGACCAAGGAAGCACATTTTTTTTTGTGTGTTATGTATAATAAGTCAAGC
ACACATGTCTCGTGTGTAATGCTCAACTACTCATGCATATACTAGATATAGAGCATAAAC
CAATAATGATGCTGGGCGTGTTAAAGACAAAAAACAGATGGCAAACCTTGCGATTGTATG
GTTAGGTCGGTTAGAACCTGGTGACCACAATGTATAGTAAGAATCTGTAATGATACGGAG
TTGTTTAAGCGTTTCTAAATAATGGGCTTCTTTCACGAAAATACACACAAAGGGGCTTTT
CATATTAACGCCCCAAGGACCTTAACTTACACTATATAAATGTATACGCACAACTCTTTA
TCAAGGGTTGATCATCTCCCTACCTTAGATTATTTGATATATTACAACAGCGTTTCTTGA
AATCCTCCCTTAGCCTCCTGCCCTCTGTTATAGAGTTCCTTTATAGCGGAGCAAATATCT
TTATATGTTAC
GenBank Accession FR804126 [GenBank]
Graphic View Graphic view of gene At1g47271
Predicted Position of Insertion Chr1:17329360 - go to primer design
BLAST e Value 1e-13
Hit Clone Code (BAC ID) F8G22
Hit Gene Code At1g47271 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cystathionine beta-synthase (CBS) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR804126 [GenBank]


Last Updated on 10.06.2021 13:37