SimpleSearch - Line and FST details


Line specific information

 
Line ID 140H07
Vector Used pAC161
Line Availability available as T3 set from NASC (N413435)
Segregation Analysis 50:17:10
Confirmed for Hit At1g04980
Parent of DUPLO pair 49
Parent of pair(s) none

Gene hit At1g04980

 
Sequence (A. th genome BLAST matches underlined) 
>56-K012876-022-140-H07-8409
TTGATCCATGTAGAATTTCCCGGGACATGAAGCCTTTACAATTGAANTATATCCTGACAC
ATGCACTGCTGACTCCTGCGCAGCATTCCCCAGGATAGACATTAAACGAACTTAGCACAT
TCCGTATGACTACATACGTATTATAAATAATATAGTACACTGAAGCGGAAGCTGTACAGT
GCTAAACGAATAAAGAGAAGATCATATAAATCAGCGGTCACGGACATACCTTAAACTTGA
AATTAGAAGGAGTGAGTTGAAGCACAGGCGACGAAGATCCATAGAGAGCATTACCGCGAT
CGAACAAGGCAAACAACAGACAGCAAATTGGGAACACCGTTGATTTGTACATTTTTCTTT
CCATAGTTTCTTCCCTCTCTTTCTTCTCCACCAAAACACAAAAAAGTGACTCTTTAGGAC
ACGAACTAAAAACATTGTCTACGTGGACTTACGTGTACGCACCAATGATATTGTCACACG
TCAGCACACTCTCCTCTCATCTACTTGGCCATGTTTTTTGGTTATCTTGTTCATAAACAG
AGGAATCCTTTTTCTTTTTCTTTTTTATGTGCGAAAACAGAGGAATCCTTAAATTTTGAT
CTCGATATAAAGATTAGCTGAATCACATTTCATAGTCCACACTACTATGGGATCCTCCCT
ATAGTGAGTC
GenBank Accession AL765576 [GenBank]
Graphic View Graphic view of gene At1g04980
Predicted Position of Insertion Chr1:1415816 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F13M7
Hit Gene Code At1g04980 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation PDI-like 2-2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37