SimpleSearch - Line and FST details
Line specific information
| Line ID | 141C11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N413475) |
| Segregation Analysis | 50:35:30 |
| Confirmed for Hit | At1g70730 At1g70730 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 2901, 3035 |
Gene hit At1g70730
| Sequence (A. th genome BLAST matches underlined) | >83-K012877-022-141-C11-8409 TTTTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACATTTGAATATATCCTGTGG CGAGCCTCCAGAGTTTGGCGCCGCTGCTGATGGTGATGCAGACCGAAACATGATCCTCGG TAAAAGGTAACAGAGACTAATTCTCTTTTAAGTGAGATCACAAGAGATGTGGAGCGGATA TACCACTCTCCCCGATAACCAAAAATATCTCTTCTCCGCAAGTTTTTCGTAACTCCTTAG GATTCAGTACGCTATAATTGCTGCAAATGCTGTTGGGGCCATACCATACTTCAGCTCTGG TTTAAAAGGTGTTGCTATGGGATCCTCCCTATAGTGAGCGTATTACCTCACTGAAGATGA TAAAATAAAAGCCTTTTTACACAGTGAGTCTGAGGAAAGGAGATGAAGAGGCTAAACGAG AAGGTGACGCGTGTGGCTCGTCTCTTTTCGTTTTTTTTTTGGGAAGGATCTCTTTTGGTC TTTTAGGGGCCCTAACTTTTTACCCAAAAGGGGTTAGGAAAAATATTTATTTTTAAATTC CCAAAAAAGCCGAAACGAATACAAGGCCCACCACGCCGCCAGAGGCCCAAAGGGCCCAAA AAACCCCTTGGCAATAACGGCCTAAAGGGACACCCAGGCCCTAG |
| GenBank Accession | AL765603 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:26670666 - go to primer design |
| BLAST e Value | 4e-124 |
| Hit Clone Code (BAC ID) | F5A18 |
| Hit Gene Code | At1g70730 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Phosphoglucomutase/phosphomannomutase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At1g70730
| Sequence (A. th genome BLAST matches underlined) | >83-K012877-022-141-C11-8409 TTTTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACATTTGAATATATCCTGTGG CGAGCCTCCAGAGTTTGGCGCCGCTGCTGATGGTGATGCAGACCGAAACATGATCCTCGG TAAAAGGTAACAGAGACTAATTCTCTTTTAAGTGAGATCACAAGAGATGTGGAGCGGATA TACCACTCTCCCCGATAACCAAAAATATCTCTTCTCCGCAAGTTTTTCGTAACTCCTTAG GATTCAGTACGCTATAATTGCTGCAAATGCTGTTGGGGCCATACCATACTTCAGCTCTGG TTTAAAAGGTGTTGCTATGGGATCCTCCCTATAGTGAGCGTATTACCTCACTGAAGATGA TAAAATAAAAGCCTTTTTACACAGTGAGTCTGAGGAAAGGAGATGAAGAGGCTAAACGAG AAGGTGACGCGTGTGGCTCGTCTCTTTTCGTTTTTTTTTTGGGAAGGATCTCTTTTGGTC TTTTAGGGGCCCTAACTTTTTACCCAAAAGGGGTTAGGAAAAATATTTATTTTTAAATTC CCAAAAAAGCCGAAACGAATACAAGGCCCACCACGCCGCCAGAGGCCCAAAGGGCCCAAA AAACCCCTTGGCAATAACGGCCTAAAGGGACACCCAGGCCCTAG |
| GenBank Accession | AL765603 [GenBank] |
| Graphic View |
|
| Predicted Position of Insertion | Chr1:26672462 - go to primer design |
| BLAST e Value | 6e-74 |
| Hit Clone Code (BAC ID) | F5A18 |
| Hit Gene Code | At1g70730 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Phosphoglucomutase/phosphomannomutase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
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