SimpleSearch - Line and FST details
Line specific information
| Line ID | 142H04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N413624) |
| Segregation Analysis | 50:36:32 |
| Confirmed for Hit | At3g61740 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 69438, 97542 |
Gene hit At3g61740
| Sequence (A. th genome BLAST matches underlined) | >32-K012878-022-142-H04-8409 TTGATCCATGTAGAATTTCCCGGACATGAAGCACTTTACAATTGAATACATTCTAGATGA CTCTATTATATAAGCCTAGATACTGAAAACCTATTTTCGGACAGCGTCTCTATAATGAAT ATCGAGGTCAGAAGAATTGGAATAGCATCCAAATGCCCTGCCTTTGTACAAGCTCCAAAC TGCCGCAAATTCATGAACTTAAGCACTCTTAATACTAAACCATTCTTGCAAACGTTCAAA CTTGCTTTCTAATTGAACAGTAATGGCGGTGGGAAGCTAACCGATTTGTTTCCTCGGCGG CTAGCTTACGGGAAATCCCTTGACATGATGCTGGCTTCTTTCCGATTGATTCATTAAATG TACATTCAGCTATGGGATCCTCCCTATAGTGAGTCGTATTACTCAANNNGGGNNNCNNCC TATAGGGAGNTNGTTNNCNCCCNNGGNNGCGNGGCCGAGAGAGGGCCTGGGTCCGAAGGC AAACACGTGGGCGAACTTTTGCCCCATACTCCTGGATAATCCGCCCAACGAGATTAACAA ACTGGCTATTGGTTCCACGAGGGACACGACATCTTCCCAGAGGGAAGCCCCCATGACACA CCGTAAAACAGAAACGCATGTGTTCACTCTTGAAAACTGGCCGCGGCAAAAAACCCCCAA CCATGGAAGCCCGGANTATCCAAAGCCGCAGCGAACAACGCTCTGGTCCTTGTGAAATT |
| GenBank Accession | AL765728 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:22851274 - go to primer design |
| BLAST e Value | 9e-104 |
| Hit Clone Code (BAC ID) | F15G16 |
| Hit Gene Code | At3g61740 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | SET domain protein 14 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit F5K7
| Sequence (A. th genome BLAST matches underlined) | >32-K024347-022-142-H04t-8409 TTTTTGGTCTTTGTTTCTGCGTGAAGCAATTTCAATTGAAGCCATTTTTCTCTTTCTTTT TTCGAGTATTTTCGAGTTTGAAATTGTCGGATATTAGCACTAAATTTAAACAGAAAAGTG TCTATGGGATCCTCCCTATAGTGAGACTTAGGGAACCTCCCCATTGCCGAGCTTTCTGTG ATCTAGGGGATCGTCGCTGATACGAGTTATTTTAGAAGCGGGCTATAGGGAGGAGCCGAT AGGGAAGCATGACAGCCCACAACAAAAAGGGTGGACGACCAGGGAGAGTATAGACAAGAG AGCCAGGAGTGTAGCAATGACAGTGTGCAGAAGGAGAAAGAGGAAGAAAGGCGGCTCGGA AGCGTAGGAGGAGTTAGGAAATGGGGAGACAATGGTGTAAGACTGTATAGATCGAAGGAA GGGTGTGGTATAATTGGAAAGAAGTGGTTGAGACGCTTATACGATGGATAGGTCCAATTG AGTAGAGAGGCAAGGAAGAGTCGGCTCGG |
| GenBank Accession | BX890838 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:2428317 - go to primer design |
| BLAST e Value | 5e-27 |
| Hit Clone Code (BAC ID) | F5K7 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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