SimpleSearch - Line and FST details


Line specific information

 
Line ID 143D03
Vector Used pAC161
Line Availability available as T3 set from NASC (N413671)
Segregation Analysis 50:27:21
Confirmed for Hit At5g23070
Parent of DUPLO pair 1039
Parent of pair(s) none

Gene hit At5g23070

 
Sequence (A. th genome BLAST matches underlined) 
>20-K013023-022-143-D03-35St
TGACGTAAGGGATGACGCNAANTCCCACTATCCTTCGAAGACCCTTCCTCTATATAAGGA
AGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTC
GGTTTAAACTATCAGTGTTTGCTTGAATCCAAAACGGCACGAGCGGTTTCCAAAACGTTC
TGACCGCAAACGTAATGACTCCTACACACAGGCATATAAACTTCATCACCACCGATCAAC
TCCGTCTATTTCTCCTACGTCTTCCTCATCGTAAACAAAGCTCTCTTCCCACAAACCTCA
CACCGTGACGTCAGCTTCGTAACCGTATCCGCAATCGGAATCAAATCAAGAACCGAACCA
AACCTCCTCCTCATAAAATCACCATCCAATCCAGCAACAATTACAGTTTTACCCTCTTTA
TCAGCAGCTTCACGGCAAAACTCGTAAAGATCTCCGAAGAATTGAGCTTCGTCGATTCCA
ATCACATCTAATCGATTCTCGTAGTCGTCGAATCCGAATCTCTCTTTGAAGGACGAGAGA
TCGGGGGAGTGACCAGCAAGGGTATTTCTCACCGTCGTGAGTAACTATTGATTCGGTGCA
GTATCTTGTGTCTTTGTTGGATTTGATGATTGCGATTCTTTTACCGGTTTCTCTTTCGGC
GAGATACGGCGGAAAATGGTTGTTGGTTTCCCGGAGAACTTGGACCGACTACGACGTGGA
TTTCGCCGGGAGATGAGGA
GenBank Accession AL765778 [GenBank]
Graphic View Graphic view of gene At5g23070
Predicted Position of Insertion Chr5:7742796 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MYJ24
Hit Gene Code At5g23070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Thymidine kinase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR804186 [GenBank]


Last Updated on 10.06.2021 13:37