SimpleSearch - Line and FST details
Line specific information
| Line ID | 143G09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N413713) |
| Segregation Analysis | 54:17:4 |
| Confirmed for Hit | At1g25380 |
| Parent of DUPLO pair | 2427 |
| Parent of pair(s) | none |
Gene hit At1g25380
| Sequence (A. th genome BLAST matches underlined) | >71-K012977-022-143-G09-8409 NTGATCCATTGTAGATTTCCCGGACATGAAGCACTTTGCAATTGATTATATGCTTGCCCT ACTACTTTATCCCGCTTTTATTTTACGCAATGTATCTGGCGTGTTAGTGCCTCCTGTACC CACATAGCGATCGTGTGATTCAGTAGGATATATCATGAAAAATGTAGTCTTCTGGCTTTC ATTGTTGTTGTAATCTAAGACACTGAACATTATGTATCTTTCACACCACTTAACATGTGA ATCTCGGGCTCTCTCTTTGCCGGTTAACAGAATTGAGCCAATTTTGTGTTAGCCACCAAC GAAAAATAGCTTCGGTGAGGGTCTTGACGACCTCGCCACCGTCCGTTTTAGAGGCTCTAA GATCTTGACACGTGACTTTTCATGATGGGTTAAAGATGGTATGACTATTCTACCTTGAGG AATAACTTCGCTCGGTATGGGATTCTGGGTATCTGGATAGTGTGAGTCGTTNACCTGCCC AATTTGGAAGGAGAGCTATGATGGTTGGTGAAAGCCCTCGATACATTCCCCTATAACCTT CTTCCTTAATTATATTCTTCAGACTTGTAATGATTACACCACCTGATATCACAAACAGAT GTAGCTATGGGATCCTCCCTATAGTGAGTCGATTTACT |
| GenBank Accession | AL765813 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:8904722 - go to primer design |
| BLAST e Value | 5e-68 |
| Hit Clone Code (BAC ID) | F4F7 |
| Hit Gene Code | At1g25380 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NAD transporter 2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit MNC6
| Sequence (A. th genome BLAST matches underlined) | >71-K013032-022-143-G09-35St TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGATATTTTCGGACTACA CGAGCGTCTCTAGCTACACCTTGTTGACGAAAAGGCTCTTTGTGCCGTAGATTCACATGA AACTCTGTTTGATCTGATCGCCAGTCTTTACAGCGAGAACTAGTTATGTCCTCTATTTGA ATCTTTGACTCCAGGGGAATTGCGGATCCTCTATGGGATCCTCCCTATCATGAGGACAGA ACCATCAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTC GGAAATCTTTATTTCGACGTGTCTACATTCACGTCCAAATGGGGGCTTAGATGAGAAACT TCACGATCGATGCCTTGATTTCGCCATTCCCAGATACCCATTTCATCTTCAGATTGGTCT GAGATTATGCGAAAATATACACTCATATACATAAATACTGACAGTTTGAGCTACCAATTC AGTGTAGCCCATTACCTTACATAATTCACTCAAATGCTATGGGATCCTCCCTATAGTGAG CGNATTAC |
| GenBank Accession | FR804206 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:21768086 - go to primer design |
| BLAST e Value | 0.36 |
| Hit Clone Code (BAC ID) | MNC6 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | FR804205 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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