SimpleSearch - Line and FST details


Line specific information

 
Line ID 145D01
Vector Used pAC161
Line Availability available as T3 set from NASC (N413861)
Segregation Analysis 50:46:37
Confirmed for Hit At5g10140
Parent of DUPLO pair none
Parent of pair(s) 3761, 3825, 95389, 95393, 95396

Gene hit At5g10140

 
Sequence (A. th genome BLAST matches underlined) 
>04-K012979-022-145-D01-8409
TTTGATGCATGTAGATTTCCCTGACTGAAGCCATAAGAGAAGTTGACTTTCTTAGAATCC
TCCTATAGTGAGTCGTATTACTATTCGCCGGTAACTTAATAATTCTAATTGAACCTCTAT
CTAGATTCAGAGCTGCCATTTTGGTTGAGATCCATACCACAACTTTAACCATCAAAAAAC
ACCTATATTCTTTACAAAGCGTGTGATCAAAACCATTATAAGAACAGAACCTATTTACCC
TCAATTTTCTATCATGTGCACCCCTATAACATTGGATACGGACTACAGACAATGGTATAA
AATTATTAGTTACCTCTTTTCTTTGTGTATCCCAGTTTTAAAAAGATTTGTTTACAAACG
CCTCTTTCATGAGTGCATTAGTAATCGGGAGTCAAAATTGGAAACAGCACCTCTTTGTAT
CGCAGTAATACCAATGTAACATAGACGAGAAGACTTTTGGGATTTTTCAATGAACCTTGA
AGACATGGATTTTCCCAGCGATAGAGCTA
GenBank Accession AL765941 [GenBank]
Graphic View Graphic view of gene At5g10140
Predicted Position of Insertion Chr5:3176458 - go to primer design
BLAST e Value 3e-119
Hit Clone Code (BAC ID) T31P16
Hit Gene Code At5g10140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation K-box region and MADS-box transcription factor family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37