SimpleSearch - Line and FST details


Line specific information

 
Line ID 145D08
Vector Used pAC161
Line Availability available as T3 set from NASC (N413868)
Segregation Analysis 50:11:6
Confirmed for Hit At5g10540
Parent of DUPLO pair 2223
Parent of pair(s) none

Gene hit At5g10540

 
Sequence (A. th genome BLAST matches underlined) 
>60-K012979-022-145-D08-8409
TTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGCCCTA
TTATAACAAACTATGAGTACACATGCCCCCAAATGTAGTTTTCCCTGCCCTATCGGATCC
TCCCTATAGTGAGTCGTATTACTCAGNGAGGAGGGGGCTTGCGAAAGATTGCGGGATTGT
GCGTCATCCCTTACGTCACTGGAGATATCACATCAATCCACTTGCTGTGAAGACGTGGTT
GGAACGTCTCCTTTTTCCACGATGCTCCTCGTGGGTGGGGGTCCATCTTTGGAACCACTG
ACGGCAGAGGCATCTTCCACGATGGCCTTTGCTATATCTGAGTGATGGCGTCAGAAGGAG
CAACCTTACTTTTCCTCCATTTTTTCATTACAGAAAGAAAATGTCGCAGCGTTGTTATCC
GAGGAGGTTTCCGGATATTACCCTTTGTTGAAAAGTCTCAATTGCCCTTTGGTCTTCTGA
GACTGTATCTTTGATATTTTTGGAGTACACAAGCGTGTTGCGCTCCACCATGTTGACGAA
GAATTTCTTCTTGGCATTGGAGTGGAGGAGACTTTGTCTGAACTGTTCGCCAGCCTCTAC
GGGGGAGTTCTCGTCAGGCCCTCCACTTGGCCCTTTGAACTCCAGGGGACTGGGGAT
GenBank Accession AL765948 [GenBank]
Graphic View Graphic view of gene At5g10540
Predicted Position of Insertion Chr5:3330769 - go to primer design
BLAST e Value 4e-19
Hit Clone Code (BAC ID) F12B17
Hit Gene Code At5g10540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Zincin-like metalloproteases family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37