SimpleSearch - Line and FST details
Line specific information
| Line ID | 146D10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N413966) |
| Segregation Analysis | 50:10:9 |
| Confirmed for Hit | At4g24860 |
| Parent of DUPLO pair | 2450 |
| Parent of pair(s) | none |
Gene hit At4g24860
| Sequence (A. th genome BLAST matches underlined) | >76-K013035-022-146-D10-35St ATTTATCACAGATGTATGAAGGTAATACCTTTTATTTGCGAGACTATGGCGATNNCTCCT ATAGT |
| GenBank Accession | AL766042 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:12803092 - go to primer design |
| BLAST e Value | 7e-15 |
| Hit Clone Code (BAC ID) | F6I7 |
| Hit Gene Code | At4g24860 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g24740
| Sequence (A. th genome BLAST matches underlined) | >76-K104555-0022-146-D10-8409 TTGAATAGATTCAATTCTGCGATGACCATCATACTACATTTGGTGCATTCCCCGTGACAA CCAGTTCAACCACCCACGCGACTTATTTAATGTAGGATCGTCACTCGGTTCCTTTTCAGG GGCACTCTGTTCCTTTTCGGATCTATGGGATCCTCCCTATAGTGAGTCGTATTACTCCCG GGGCAGAGCGACCGTGTGGACCCTGCAATCCTTCGTAACCACAGTTTACACTTGCAGACG GAGAGAAGGGGTAGTCTCATATTGCATGATGATCTTAAATAAGGTGAAAGAAGTAATCGA AGAAGATATAGGAGCGAATTTACCTCAAGTCAATGGAAGATGGATTTAACAAAAGGAGGT GGGGAAAAAATGACAAGAGAGGAAGAGAAACAGCAGGAAGGAGAAGCGAGGTCAAATGGG GATTAGGGTATAGAGTGAGTAATGATTATGAAATGAGATGAGATGGGAAGTAAGAGATTG TAGCCAGTAAATAGGCGAGAATGAGTGGGTAACGTATCATTAGTTGTGGTACTACGAGGA TGGATTGGACATTTAGATGAAAGACGTTGATGTAAGGATCACAAAACAGAGCATGAAAGC GTAAAGTGAATAACGAAGTGAAGAATGATGGGACAGACATTTGAGGAGAGGAAGTAAGAG GAATAGGACTTGGATTACTAAAAATTATAAATGAAGAGATAAGAGTCAATAGGGAGTAAC AGAAAAGTTGCAAGAAGTGAGAAGCGAAGACGGTTGAGGTCAGATGATGAAAAATAGAGA AGAAGATCTAAGCAATGATGAGTATGATGGAGGATGGTTACTTAAATGAGGGAATTGAGA ATAGGTGAATTGAGATGCGATAAAGATTAGTGTAAATTGGGATAGAGAGGAACAGGGGAG AGGGGAGTTAGTGTGGCGTGGCTGAAAATAATATAGAACGAAAGGAGATAAGTGAATGAA GGGTTGAGGAGTGAGAGTAAGAAATAGGATAAACTGTTGATATAGGATAAGTTAATGAGG CGAAATATATAGTGAGATAAAAAGATGAAGGAGGAGGGCTTGAAGTGGAAGATTGTTAGG GGACGGTTAAGATAGAATGAAATAGACTAGATATATAATAAGCAGAATATAGGAGAGACA GTAGA |
| GenBank Accession | FR804338 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:8485070 - go to primer design |
| BLAST e Value | 6e-50 |
| Hit Clone Code (BAC ID) | T4C12 |
| Hit Gene Code | At5g24740 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | vacuolar protein sorting-associated protein, putative (DUF1162) |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | FR804339 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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