SimpleSearch - Line and FST details
Line specific information
| Line ID | 146E11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N413979) |
| Segregation Analysis | 50:28:22 |
| Confirmed for Hit | At4g30940 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 780 |
Gene hit At4g30940
| Sequence (A. th genome BLAST matches underlined) | >85-K012980-022-146-E11-8409 TTGATCCATGTAGATTTCCCTGACATGAAGCTACGTTTCTATTGCATTGCGATAGTGGAC GAGGGATAAACTGGTCTGGTATTTATCAGATAGTACGGAGTGCGTTACTTATAGGCGGAA CAGAAGAGACTGTGAGACCCTACCTCTATGGAGGAGAGCAATTCAATATGTGTGGTGAAT GAGTTTGAAGATCTATGGGATCCTCCCTATAGTGAGTCGATNTACTCANNNNGNNNGNGN NNNNNTNCNNNNGCCNTNNNTNGNNNTNNNNNGATGGTCNTCGTTGAAGAATGCCTATTG CCGACAGTAGGTCCCGACGATGGAGCCCCCACCCACGAGGGAGCATCGTGGAAAAAGAAG ACTGTTCCTAGCCACGTCTTCATAGCGAGTGGATTTGATGTGATATCTCCACTGACTGTA AGGCGATGACGCACANNTCCCACTGGTCCTTCCCGCAGAGCCCTTTATCTATATAAGGGA ACGGCCATTTCATTCTCGGAGAGGAC |
| GenBank Accession | AL766057 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:15056023 - go to primer design |
| BLAST e Value | 1e-13 |
| Hit Clone Code (BAC ID) | F6I18 |
| Hit Gene Code | At4g30940 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | BTB/POZ domain with WD40/YVTN repeat-like protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | FR804364 [GenBank] AL766057 [GenBank] |
Gene hit FCAALL
| Sequence (A. th genome BLAST matches underlined) | >85-K104557-0022-146-E11-8409 CTCAAAATGAGCTTTTTCAATTTAAGATTTGATTATGTGGTCATTAAATAGTAACGTAGT GCCTATGGGATCCTCCCTATATTGAGTCGTATTACTCAATGGGTGTGGCGAATTTGTTAG CACACCGAATTGGTCCTCCCATGGCTGAGTTTTTATTTTTTCTCAACCTCACACCTTTCT GAACATGAAATTGGAATCTGGGAAGGGGGCAATCACGAATTCGATCATTAAGTTTCTCCT TTCNCCTATCAATCCGACCCGACTTAATTGGCCCGGGTTGCGGATGACAAATCATTATAA TGTGTTTCTGCCTTCATCCCCCGTTTGCAATAGCAAAAAATTTGGGGGATAGGCGTAATA TTAATCCCCCTAATACCAAGCACAACCGGGAAGACCCTGTCTTTTGATTCCAGAGAATTT GAGTAGGGACCCCTGAAGTAAGAAAAACGAAGGAAGGGGGGAAAGCGGGAGGAAACGAGG AAGGAGGGGGAGAAGGGAAAGAAGAGAAAGGGGAAAATGAAAGAAAGGGACGAGTAGAGA GGGAAATGGGACGGAGAGGGGNTAGTAAAAGAGGGCGGAATAGGGACTGAGAGGAGGAGA GGAAAGATGAGAAATATGAGGAGAGAGTAGAAGAAAGAGAAAATGAGTCTAAGGGGGGGA GAAGACGGAGACGGGAGGAAGATGGGGAGGAAAAGAGAAGAGGAAGAGAGAGGTGGGAAG GCTGCGTATGAATGTAAGAAAAAACTGTAAGTAAAAGAGAAGGGCATAAAAGAACGAAAT AAAAAGGCAAACAAGATGAAGCAAGTGAAAGGATAGTGGACGGCAAAAAGGCGGAAAAAA GAGAGGAAGGGAGAGAAAAGAGTGAATGGTAAGAGGACGGGGAAGAATAAAAAAACGGAA GAGAGAAAGACACAGAAAAAGCTAAAAATGAGATCAACGAAGAGAAGGAGGGGTGTGCTT GGGGCGGGAAGATACGGAAGAGGGAGTAGTGGGAAGTGAGAGTGAATAAAAGTGGTGGCG GTCGGAGAAAATATAGGGAAA |
| GenBank Accession | FR804365 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:8051694 - go to primer design |
| BLAST e Value | 1e-20 |
| Hit Clone Code (BAC ID) | FCAALL |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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