SimpleSearch - Line and FST details
Line specific information
| Line ID | 148E03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N414163) |
| Segregation Analysis | 50:43:34 |
| Confirmed for Hit | At1g08390 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 64283, 95111, 95112, 95113 |
Gene hit At5g01140
| Sequence (A. th genome BLAST matches underlined) | >21-K013396-022-148-E03-35St CTTCCTCTATATAAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGAT TGTCGTTTCCCGCCTTCGGTTGAGACACTCCCTATAGTCGAGGCTCATAATCACACATCT TTTATGGCTGAGGCTGGTAAGGATTTTGTTCAAATTCTATTCAGTTCTTTGACATTGCCA ATAGGAACAATCGTCAGATTGCTTGCAAAGCATCGAAAGTCTGATCCAGTTACTATTGGA TGTCTTAGAAACCTTTATACAAGTGTTGTGGACATGGAACTCGATGATTTTGAGACTGAT GCTTGTAAGCAGATGTTGCTTTATCCCAAGAACATTAGGGAGGCTCACTACAGAATCTTT AAGCTCAACATTGACACTAATGAAAGCTTAAAGTGTTTTGGCTGCCGATTTTTCTCAATC TGCGGAATGGGCACTATGGGATCCTCCCTATACTGAGTCGATTTCACTCACCCATCCCCG CACCGTCCTCACCGTACCCAACGACCCCCCCCTACCCAGTTCCTGCCCCAGGCCCCCCGC CCAAGCGTAACGCCACGGTATTCCCCCCACGACACCCCTCCCTCATTGTGTGCCCCCCCC CCCACCTCCGCGCGCTTGTTCCTAGTCCCGCTTCTCTGAATTTGCTTTCCCACCCCAATT CCCCCTTCCATTTTCAGCCCCTCCACCCCCGTGTGTTTCCACACTTCGCTCCAGTTCCGC GATCCCAGCCACGCGCCCCCTCCCNTGTCCTTCAGCCCAGTACGCTCCGCGCCCCCTCCT CCGTACTTTTCCTT |
| GenBank Accession | FR804474 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:49949 - go to primer design |
| BLAST e Value | 2e-157 |
| Hit Clone Code (BAC ID) | F7J8 |
| Hit Gene Code | At5g01140 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein (DUF674) |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
Gene hit At1g08390
| Sequence (A. th genome BLAST matches underlined) | >21-K013071-022-148-E03-8409 NTGATCCATGTAGATTNTCCCGGACATGAAGCCTGTAAATGCGGATGATACTTTGACTCG AACATCACAAGAGAAGATGAATCTTAGATCACTATGGGATACTCCCTATTGTGAGCCCTA CTCTCTGAGATCCTGCCCCTATAGTGAGAACGCATGACGTGATTTAGAAGTCATGGACGC ATACAGACTCTTCTATGAGCCCTTGATCCAAGAGTTCTCTTGATTCTTCACTTCACTTAA CTTATCTATTCTTCTTTTAGTTTCACCAGACCAGATTAATCCTTTTTTTGTTTATTGAAG ATGATCTTTAGAGTCATGGGTATGTACTTCTACGGAATCAAAAGCAAGGTTGTATCATTT TTAACACACCATTGCTATGGGATCCTCCCTATAGTGAGTGGTTTTACTC |
| GenBank Accession | AL757442 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:2642939 - go to primer design |
| BLAST e Value | 4e-106 |
| Hit Clone Code (BAC ID) | T27G7 |
| Hit Gene Code | At1g08390 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | recQ-mediated instability-like protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |