SimpleSearch - Line and FST details


Line specific information

 
Line ID 149D06
Vector Used pAC161
Line Availability available as T3 set from NASC (N414250)
Segregation Analysis 50:46:34
Confirmed for Hit At1g19330
Parent of DUPLO pair 12234
Parent of pair(s) none

Gene hit At1g19330

 
Sequence (A. th genome BLAST matches underlined) 
>44-K013072-022-149-D06-8409
GTGATCCATGTTAGATTTCCCGGACATGAANGCCTTTACAATTGAATTATACTCATACTT
TATTTTGGCGCCTGGTCAATAAAACATCATAAGCAAATATGCACTTGTTATCTAATTCTC
CATCATATTTCTTGACATTTTTGTTCTCCACCTTAAGGATCCAAGCTGGCTTTTTGAAAT
TTGTTAGTCTTTTGATTAATGTTAATCATTTGTTTTAGAGGTTTTTCTTCTTTTTTGTTC
TTTCTTAAGTAGTTGAGTCTTTTTCGTCCCCAAGCAATGTCACTTCTGTCGATTACTATT
CTTTATAAAATCTTTATGCTTTGGCTGGCTAGGGGATATTCCCTACAGCGATGCATATTA
CTTCATGATAGAGACTCTGAGTATGTGGACCTAGGGGAGTACACTTCGCCATATTGATAT
GGGATCCTACTTACAGTGAGTGGTTAAACATTAAGATGCGAGGAAACATAATTATTGACT
TGATTAGTGAATCTATAACTATGGGATCCTCCCTATAGAGAGTCGTATCCCCAAAAAAAA
GGTGATCATCGGTGAGAGAATTAGGGGAAAAAAACCCAAATTTGAAATACAAAATCATCC
CCAAAACCCCCATCAGGTTCATCAATGGGGAACTGGGAAAATCCAGAAAACAGAGAACAA
TACCTTTTGGGATCCTCCCTATAGGGAGTCG
GenBank Accession AL757507 [GenBank]
Graphic View Graphic view of gene At1g19330
Predicted Position of Insertion Chr1:6682384 - go to primer design
BLAST e Value 4e-53
Hit Clone Code (BAC ID) F18O14
Hit Gene Code At1g19330 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation histone deacetylase complex subunit
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37