SimpleSearch - Line and FST details


Line specific information

 
Line ID 150A08
Vector Used pAC161
Line Availability available as T3 set from NASC (N414312)
Segregation Analysis 50:34:33
Confirmed for Hit At1g63630 At1g58080
Parent of DUPLO pair none
Parent of pair(s) 98

Gene hit At1g63630

 
Sequence (A. th genome BLAST matches underlined) 
>57-K013073-022-150-A08-8409
NTGATCCATGGTAGATTTCCCGTACATGAANGCCTTTACTTGCGAGATATCTCCTGACGT
ACTATACGGGATCTATAAAGGCCTATGGGATCCTATCCATAGTGAGTCGTATTACTACAG
TTTTTGTTCTTTGACACACTTCTATGGGACCCTCCCTATCTAGAGGCGTATTACTGAGAT
TGACAATGCGCCTGTTATATCTCAAACCTTGAGAAGATCGATGGCATCAGCAGCCATACG
TCCTTTACTATGGGATCCTCCCTATGGTGTGTCGATTTCCTCCATGGGTGTGATGTGGCT
CTGACCCATCTTCCTAAGCAGATTCAAAGCCGTGACAACCAATCTTACACAATCCATTTA
CAATTGTTCCGTAAGTGACCGCGTTAGGTTGATGACCTTCTTCTACCATCCGATCAACAA
GAGCTATGGGATCCTCCCTATAGTGAGTCCGATTACTC
GenBank Accession AL757549 [GenBank]
Graphic View Graphic view of gene At1g63630
Predicted Position of Insertion Chr1:23587548 - go to primer design
BLAST e Value 2e-61
Hit Clone Code (BAC ID) F2K11
Hit Gene Code At1g63630 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Tetratricopeptide repeat (TPR)-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g58080

 
Sequence (A. th genome BLAST matches underlined) 
>57-K028303-022-150-A08-8409
GACATGAAGCATTTACAATTGAATATATCCTGACAAATCTACATGATCATTTACAATTGG
TAATTGGATCCTTTTTCTTTTTCTATTTTTGTTTTTGATCTCTGAAGGTATCCACCCTAT
GAGGGATCCTATTACTCTCCCTCTGAGATTAACAATCGCAATGTTAAATCTCAGACCTTG
AGAAGATCGATTGCATCAGCAGCCATACGTCCTTTACTAGGAAGACCAAGACGAATCTGG
TCACGCTCAACGACAACAGCGGCCGGAGCAGGAGCTGGAGAGGATCCGTTTGTTGCGACG
GACCTTTCAACGGTGGAGACACAAGAAGAAGGCCGACTGAGAGGTCTCCGA
GenBank Accession CR770226 [GenBank]
Graphic View Graphic view of gene At1g58080
Predicted Position of Insertion Chr1:21507001 - go to primer design
BLAST e Value 2e-94
Hit Clone Code (BAC ID) T15M6
Hit Gene Code At1g58080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ATP phosphoribosyl transferase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR804509 [GenBank] FR804509 [GenBank]


Last Updated on 10.06.2021 13:37