SimpleSearch - Line and FST details


Line specific information

 
Line ID 151G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N414478)
Segregation Analysis 50:48:47
Confirmed for Hit At5g24150
Parent of DUPLO pair none
Parent of pair(s) 4627, 8424, 10001, 10068

Gene hit F13J19

 
Sequence (A. th genome BLAST matches underlined) 
>47-K013138-022-151-G06-8409
TTTGATCCATGTAGATTTCCCTGGACATGAAGCCTTTACAATTGAATATATCCTGCCGGA
AAAGTTCCATTGTCTTGCTTCTTTCGTCGGAGGGCTCTCTTTGGGCTTTCCGAAAAGGTA
TCACATGCCAAGTTTGGCCTCACGGTATAGAAGTTATAGAGTCATAAAGTTTTAACCAAA
AAAAAAAAAAAAAAAAGGGGGGGCCCCCCCGGGGCCCCCCGGGGGGGCCCCCCCCCTATG
GGGCCCCC
GenBank Accession AL757713 [GenBank]
Graphic View Graphic view of sequence AL757713 of line 151G06
Predicted Position of Insertion Chr4:3055959 - go to primer design
BLAST e Value 2e-61
Hit Clone Code (BAC ID) F13J19
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g24150

 
Sequence (A. th genome BLAST matches underlined) 
>47-K013133-022-151-G06-8409
TGATCCATGTAGATTTCCCGGACATGAAAGCACTTACAATTGGCTTTAACTTGCCATGAT
TCTCTCTGGTTCTCTCAGGTCCCTCTCTATGACATGGACTCGACGCCCGTACTATGTATA
ATCGGAAATTATCATACTAATATATTCGATCCAACCCAAAAATATTGCAGCCGAAGTGTA
TAATGCAAAAAAACAACAACAATCATATATAGTGTATATAGTTCAAACCTTTATCAGTAC
TCATGCACAAATATTATACAAAAACAACAAGAATCAATTTAATACTAAGACGCAAATCTG
TGAAACTGTGACGCCACTTTACATACCTTAGCAAGAGCATATGCGAGAGCCGAGCCGCCT
ACTCCAGCCCCAACGATGATAACGTCAGTAGCACCGTCTTCTCGCTCTTCAACCACCGCA
TCGCCCAACTGCGTCGCCTTCTTCCCCCTGTTTGTGACGTAGAACACTGTCCAAGTCAGC
ATGAAGGCGAGTAGCGTCCATAGGCAAACGTTCGTAAAGGCCATATCCTTATCTATAAGC
TATGGGATCCTC
GenBank Accession AL757712 [GenBank]
Graphic View Graphic view of gene At5g24150
Predicted Position of Insertion Chr5:8174925 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MLE8
Hit Gene Code At5g24150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FAD/NAD(P)-binding oxidoreductase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37