SimpleSearch - Line and FST details
Line specific information
| Line ID | 152H10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N414590) |
| Segregation Analysis | 50:50:45 |
| Confirmed for Hit | At4g18700 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 89893, 89915, 89954, 89993, 90009, 90073, 90084, 90118, 90128, 90137, 90145, 90157, 90161, 90166, 90168 |
Gene hit At4g18700
| Sequence (A. th genome BLAST matches underlined) | >80-K013139-022-152-H10-8409 NTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATTCATGAGTG GTAGATCTACATTCTACAATCCTTCTTCCTCCAGTAAAGCTCACAACTTTAGCAATCTCT TCCAACTTCGATATAATCTTCGAAACCGGAGCTCCCGAAACAAACCTATGGGATCCTCCG TATAGTGATGGCGTCCGGATGGCTGGCGGCCGGTCCGACATCCACGACGTCTGATCCGAC TCGCAGCATTTCTATCGCCGCGGTGACAGCGCCGGCGGGGCCTATGGGATCCTCCCTATA GTGANNN |
| GenBank Accession | AL757839 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr4:10289372 - go to primer design |
| BLAST e Value | 3e-42 |
| Hit Clone Code (BAC ID) | F28A21 |
| Hit Gene Code | At4g18700 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | CBL-interacting protein kinase 12 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit K2A11
| Sequence (A. th genome BLAST matches underlined) | >80-K013134-022-152-H10-8409 NTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGAAAAG AGCGTTTATTAGAATAATCGGATGTTTAAAAGGGCGTGAAAAGGTTATATCCGCTCGTCC ATTTGTATGTGCATGCCAACCACAGGGTTCCCCTCGGGAGTGCTATGGCATTCCGTGCGA TAATCGACTTCTGTTCAACCACCCAAACGTCGGAAAGCCTGACTACGGAACAGCATTCCA AAAAGATCCCTTGGCTCGTGTGGGTCGGCTATGGGATCCTCGTATTAGTGAATCCTCCCT ATAGTGAANNTTNNCGGTANTGTCTTAATGTNGTCAGGGGAAATAAAATTACCGTGAATG GCGAAATGAATTGGGTTCCACATATTGATTTCTATGGGATCCTCCCTATAGTGAG |
| GenBank Accession | FR804582 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:1540743 - go to primer design |
| BLAST e Value | 3e-14 |
| Hit Clone Code (BAC ID) | K2A11 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
