SimpleSearch - Line and FST details
Line specific information
| Line ID | 153C02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N414618) |
| Segregation Analysis | 50:30:22 |
| Confirmed for Hit | At4g00820 |
| Parent of DUPLO pair | 11936 |
| Parent of pair(s) | none |
Gene hit At4g00820
| Sequence (A. th genome BLAST matches underlined) | >11-K012818-022-153-C02-35St TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCAGTGTTTGACTATGGGATCCTCCCTATAGTGAGTCGTATTACTCAANN CNCNGCTNNGCNTGAAGCCCTTTACATCCGGCGGCTCACGGCTGAGAGGCGTCGATCTCC ACGGTTGTGCAAACCGGTGGTACTCTTTGATCCGCTGAAGCTCGTTTATCCCACGGGTTA GAAGCCATCCATCTGTCTAGCCATTGAGGACTCTCTTCTTCATACTCGACTCCTGTAGAA CAACGACCTCTTGGACTCCGAACCTTTCACCGAAATCAAACACCGAAACGAATCCCATTA CCGAAAACAAACGAACGANACANTNTGAATTCGCATCTATCACCCTGGCGAGAGAAACCT GGGGATATACTATTGCTACTCTGACGTCTCAACGCATTGTCTCGTCT |
| GenBank Accession | FR804588 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:350682 - go to primer design |
| BLAST e Value | 2e-89 |
| Hit Clone Code (BAC ID) | T18A10 |
| Hit Gene Code | At4g00820 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | IQ-domain 17 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At4g19260
| Sequence (A. th genome BLAST matches underlined) | >11-K012550-022-153-C02-8409 NTGATCCATGTAGAATTTCCCGGACATGAAAGCCTTTACANTTGAATATATCCTGAACAA ATGTGTGATCTACTTAGTAGAGGAAACTGATCAGCAAACTCACGATCATCATTGTGTAGA AGTTCCCGAACAAAGATGATTTCGAGAGCCTGTAAATTGTAGATTGATCGTAAATTGTAC AGTACACAAACTAATTAATCAAATATGTATGCATGAGTAAGTATTGGTCCACGTACTTTA ATGTCTCTGAATTTGAAGTGGATTGAACCAGCTAATTGATTGCAAGCTACTATTGAACGT CTTCTCTTCGTCCTCCCCTCAGTACCATAACACATACCTGTAAATTAAAATGAATCAACA TTATATATATATTTATTTATTAGTAGAATAGAAATCAGGAAAAAAAGGTTCTCACAATTC TTCATGAATATCATCGAATCATGAAATATAACATGGCTGATAACCCCCTCAATCCTCACG TCTTCGGTAGTAATCAAGCTACCTACGTGCCCTATAGCAGAATTATGCCTATGGGATCCT CCCTATA |
| GenBank Accession | AL757857 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:10534548 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T5K18 |
| Hit Gene Code | At4g19260 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Galactose oxidase/kelch repeat superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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