SimpleSearch - Line and FST details


Line specific information

 
Line ID 153E12
Vector Used pAC161
Line Availability available as T3 set from NASC (N414652)
Segregation Analysis 100:95:66
Confirmed for Hit At1g53500
Parent of DUPLO pair none
Parent of pair(s) 2924, 6929

Gene hit At1g53500

Sequence (A. th genome BLAST matches underlined)
>93-K012550-022-153-E12-8409
NTTTTGATCCATGTAGACTTCCCCGGACATGAAAGCCTTTACAATTGAATCTATCCTGAA
ACTTGTTTTTGAGTTTACCAAGAACAATATTTATGGTACTCATGTTCTTTTGGAAGCCTG
TAAAGTTACAGGACAGATCAGGAGGTTTATCCATGTGAGTACCGATGAAGTCTATGGAGA
AACCGATGAGGATGCTGCTGTAGGAAACCATGAAGCTTCTCAGCTGTTACCGACGAATCC
TTACTCTGCAACTAAGGCTGGTGCTGAGATGCTTGTGATGGCTTATGGTAGATCATATGG
ATTGCCTGTTATTACGACTCGCGGGAACAATGTTTATGGGCCTAACCAGTTTCCTGAAAA
AATGATTCCTAAGTTCATCTTGTTGGCTATGAGTGGGAAGCCGCTTCCCATCCATGGAGA
TGGATCTAATGTCCGGAGTTACTTGTACTGCGAAGACGTTGCTGAGGCTTTTGAGGTTGT
TCTTCACAAAGGAGAAATCGGTCATGTCTACAATGTCGGCACAAAAAGAGAAAGGAGAGT
GATCGATGTGGCTAGAGACATCTGCAAACTTTTCGGGAAAGACCCTGAGTCAAGCATTCA
GTTTGTGGAGAACCGGCCCTTTTATGATCAAAGGTACTTCCTTGATGATCAGAAGCTGAA
GAAATTGGGGTGGCAAGAGCGAACAAATTGGGAAGATGGATTGAAGAAGACTATGGACTG
GTACACTCAAAATCCTGAGTGGTGAGGTGAATGTTCTGGGAACTTTGCTTCCTCATCCGA
AAATGCTTATGATGCCCGGNTGGAAGACTTTCTGATGGATCTAATGAAAAGGAAGACGTT
TCAGCAAAAGGGTCCAAAAATTTACCGGTTGTGACCCCTAAAAATGGTGATCTTGGGAAC
CAACCGTCCTTGAAATTTTTGATTTTAT
GenBank Accession BX511289 [GenBank]
Graphic View Graphic view of gene At1g53500
Predicted Position of Insertion Chr1:19968942 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T3F20
Hit Gene Code At1g53500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAD-dependent epimerase/dehydratase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details