SimpleSearch - Line and FST details


Line specific information

 
Line ID 155A04
Vector Used pAC161
Line Availability available as T3 set from NASC (N414788)
Segregation Analysis 208:204:201
Confirmed for Hit At1g01900
Parent of DUPLO pair none
Parent of pair(s) 5585, 5637
Note

Gene hit At1g76360

 
Sequence (A. th genome BLAST matches underlined) 
>25-K013136-022-155-A04-8409
CATGGACTCGGGAGCTGCATATCCTTGTGTGCCCATGACACGTGAGGTCACGTGAGATAA
TACATTAATGGAGCGCCATTTTTAGCTATGGGATCCTCCTAATAGTGANNTTAGGCGGAA
AAATCGCCTTTTTTCTCTTTTATATCAGTCACTTACATGTGTGACCGGTTCCCAATGTAC
GGCTTTGGGTTCCCAATGTACGGGTTCCGGTTCCCAATGTACGGCTTTGGGTTCCCAATG
TACGTGCTATCCACAGGAAAGAGACCTTTTCGACCTTTTTCCCCTGCTATGGGATCCTCC
CT
GenBank Accession CT026131 [GenBank]
Graphic View Graphic view of gene At1g76360
Predicted Position of Insertion Chr1:28643681 - go to primer design
BLAST e Value 2e-18
Hit Clone Code (BAC ID) F15M4
Hit Gene Code At1g76360 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 442C06

Gene hit At1g01900

 
Sequence (A. th genome BLAST matches underlined) 
>25-K013141-022-155-A04-8409
TTGATCCCATGTAGATTTCCCGGACCATGAAGCCTTTACAATTGAATATATTCTCCCCGA
AGCACGTGAGCTTCCGAGACACGCACATGACTCCTGTACCGCCTATGGGATCCTCCTTAT
AGTGAGAGCGACAGGTAGGCGCTATTTCCATCTCTTACCTTGAGCGCTGGCCATACGGGA
ATGCACAGGCCAAGCGGGTTTTAAGAGTTTTAATAAGTTTTAAAGAGTTTTAGGCGGAAA
AATAGCCTTTTTTCTCTCTTATATCAGTCACTTACATGTGTGACCGGTTCCCAATGTACG
GCTTTGGGTTCCCAATGTACGGGTTCCGGTTCCCAATGTACGGCTTTGGGTTCCCAATGT
ACGTGCTATCCACAGGAAAGAGACCTTTTCGACCTTTTTCCCCTGCTATGGCAATTTGCC
CTATGGGATCCTC
GenBank Accession FR804640 [GenBank]
Graphic View Graphic view of gene At1g01900
Predicted Position of Insertion Chr1:310795 - go to primer design
BLAST e Value 3e-17
Hit Clone Code (BAC ID) F22M8
Hit Gene Code At1g01900 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation subtilase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37