SimpleSearch - Line and FST details


Line specific information

 
Line ID 155D01
Vector Used pAC161
Line Availability available as T3 set from NASC (N414821)
Segregation Analysis 50:42:20
Confirmed for Hit At5g16290
Parent of DUPLO pair 2499
Parent of pair(s) none
Note

Gene hit At5g16290

 
Sequence (A. th genome BLAST matches underlined) 
>86-K018347-022-155-D01t-8409
AAACATTGATCTGTAGATTTCCCGGACTGAAGCCTTTACAATTGAATATATCCATGATAC
GTTGTCGTTTTTAGATGCAGCATGCCTCGGCAGAAGGAAAACACAGCTGTGAACATCCTC
CCCATATTTTTGACGAGATGAATTATTCTTTACCTCTGAGCGGGTGCTTGGATCAGCGTT
AAGTTTAATGAGCATTAACTCACGTTCTACATGGGGCTCCTTGGAGAGATCTTCCACCTG
AACAAACCATTATGAGTATAAGATAATAGTCATGATTCATTAAAGTATATATAAGCTCAA
AAAAATTCTTAAACAAAGCAGCAAGTTATAGCCAAGGCTATGGGATCCTCCCTTAATAGT
GAGAACCCCCCTATTTCGGAATTACCCTTTTTTTTTTAATCTAAAATGGAGATTTTCAGC
AGCGTTTTATTAAAAGAAAGTACATTTTGATTAAACGAGGGGTTACTATTCCACATATTT
ATGGGCGAAAGACATAAACCAATTATTCTAAATCGGAAATCTTTATTTTGACGTGTCTAC
CTTCACGGCCAAATGGGGGGTTAAATTAAAAAATTCCCCATCGATGCCCTGATTCCCCCC
TTCCCA
GenBank Accession BX285257 [GenBank]
Graphic View Graphic view of gene At5g16290
Predicted Position of Insertion Chr5:5335082 - go to primer design
BLAST e Value 2e-101
Hit Clone Code (BAC ID) MQK4
Hit Gene Code At5g16290 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation VALINE-TOLERANT 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX285257 [GenBank]

Gene hit At2g35150

 
Sequence (A. th genome BLAST matches underlined) 
>04-K013141-022-155-D01-8409
ATCATGATAGCATAAAATTTTATAAGACCCACTCTCGAAAGTTAGAGAAGTTTGACTTGT
AAACCAAAACCACTGAATTATACTTTGACTTGAAGATATTTTTACTCTTGTATGAAATAT
TTACCATCTACTATCCAAATAATGGCACTCATCACTATGGGATCCTCCATACCGTGAGGG
ATCCTCCC
GenBank Accession FR804647 [GenBank]
Graphic View Graphic view of gene At2g35150
Predicted Position of Insertion Chr2:14818484 - go to primer design
BLAST e Value 2e-33
Hit Clone Code (BAC ID) T4C15
Hit Gene Code At2g35150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation EXORDIUM like 7
Insertion Classification Promoter
Confirmation Status failed, line belongs to a contamination group, please check line 013A03
Other FSTs Supporting this Hit FR804647 [GenBank]


Last Updated on 10.06.2021 13:37