SimpleSearch - Line and FST details


Line specific information

 
Line ID 156C05
Vector Used pAC161
Line Availability available as T3 set from NASC (N414909)
Segregation Analysis 50:47:32
Confirmed for Hit At5g08230
Parent of DUPLO pair none
Parent of pair(s) 12729

Gene hit At5g08230

 
Sequence (A. th genome BLAST matches underlined) 
>35-K013240-022-156-C05-8409
TTGATCCATGTAGATTNTCCCGGACATGAAGCCATGTACAATCCCATCTCTGCTCTTCCT
ATAGAGAAAACCGTCGAATGGGCCCTTCACACTATCTGGTATTCTATGACACCACGACTT
TTGCAGCTTTATCTTGCACCTGTCAACTGAATCCTACATGAAACCCTCTGAAGACAATCC
TATGAAATCTTCATATGCCTTTGATAATCCTTTGTATCAACACCTTGAAAGGTATTCCCA
TACATAACTCCTTTTCTCCCACGCTATCATGCATAGCAAGAGATTCATCCTTGCCATGTT
TATACAAAGGTACTTTCACTGTCTACACACTGTCTGTCTATCCAACTAAAAGCTCCGCTT
TAATAGAAGTATTATGGGACGCATTACCACTTTTAGGACCATCAGACGAAGCTATGGGAA
TATTGCTAAGACCTCCATGCACTGGAGGCTTTGAGTCTTCATCATCATCATCGTCGTCAT
AGATACAAACCGCCCTCCGTCTCTTCGGCAGCTGAGCAGCTCGAACCTTGATATCGCTAT
CAGAAGATGAACTTATCTTCTGTTCAGGGTGATTTGCCCCCTCTTTAACGAGAGACCCAC
GATAAGAGGAAACACTTGTGTGCTCCACTGTCTGTTTTCCGCGCCTTTGATAACCGACCA
TGTCCCTTATCAAATGATTTTTTCCTCCCAAGGCACTTATCCTTACACAATCCTACGCTT
TAAAATTG
GenBank Accession AL758168 [GenBank]
Graphic View Graphic view of gene At5g08230
Predicted Position of Insertion Chr5:2647416 - go to primer design
BLAST e Value 7e-160
Hit Clone Code (BAC ID) T22D6
Hit Gene Code At5g08230 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation tudor/PWWP/MBT domain protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL758168 [GenBank]


Last Updated on 10.06.2021 13:37