SimpleSearch - Line and FST details


Line specific information

 
Line ID 156D11
Vector Used pAC161
Line Availability available as T3 set from NASC (N414927)
Segregation Analysis 50:46:36
Confirmed for Hit At3g19670
Parent of DUPLO pair none
Parent of pair(s) 352

Gene hit At3g19670

 
Sequence (A. th genome BLAST matches underlined) 
>84-K013211-022-156-D11-8409
TTGATCCATGTAGATTNTCCCGNGACATGAAGCCTTTACAATTGCTGATTCAATTAATCT
TTGGTTGTTCAAATGTCGGATTCATGATAGAAGATTCTGCAGAAGTATGAATGATAGATG
CTCTCTGTTGTGCCTGACTATGAATGCTTGGTCCAGTGACTTGAGGTGGCACCCTCGAAC
CTTCGTAAGATGTGGCACTCTGTTTTTTCACACGAGTTAGGAACTAGAAGTCTATGGGAT
CCTCCTAATAGTGAAAAACTATCTTCCTTCCTTACCGTATACAAAAAGAGTGCCCTAGGG
CCGCGCTACCTCTGCGTACCCATTGCTGGAGTATGCACATACAGCTAATGCCTTGACGTT
CTCAGAGCGATGGACTCATTTGGATCCGACATTATAGTTGGGGGTCCAACAGGCACATGT
CGCACTTGCGCCTGATGGAATTGCCTGGGGCTTTCATGTGAATGGCGCATGGAGTAGAAT
AACTGAGGTGCATAGGATTGATGAGAATGTCCAATGCTCAATACTGGGCCACCTATGCCA
ACACATCGAAAGTTTTGAGAAGACAATCGAGCAACTTGCTCAGACTGAGGAGCTAGTATG
GTTGGACGAAACTGCAATGAAAATATGCAGAACACATGGGGGGGTGGAGCTGATAAATAG
GCCTCACAGCCATATGTGACATAAAACATTGCCCTGAAGTTCATGGGTGGGACCAAAGCC
TGGGGGTAAATCTATGGAGCTA
GenBank Accession AL758190 [GenBank]
Graphic View Graphic view of gene At3g19670
Predicted Position of Insertion Chr3:6835631 - go to primer design
BLAST e Value 3e-156
Hit Clone Code (BAC ID) MMB12
Hit Gene Code At3g19670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pre-mRNA-processing protein 40B
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL758190 [GenBank]


Last Updated on 10.06.2021 13:37