SimpleSearch - Line and FST details


Line specific information

 
Line ID 156E10
Vector Used pAC161
Line Availability available as T3 set from NASC (N414938)
Segregation Analysis 50:49:37
Confirmed for Hit At1g18900
Parent of DUPLO pair 2352
Parent of pair(s) none

Gene hit At1g18900

 
Sequence (A. th genome BLAST matches underlined) 
>07-K109633-0022-156-E10C-oriL
CACAATATAGGCTTTTTATATTTATTTATTTTATCTCTTTGCCGATTGTGTCTTATGAAA
TTGTTTTAGCTAGTAAGTCATAAGTTAAGGTTAGAGCTAGACAGGATGGAGTGTCTCTCC
AGTCTTTTGTCCTCAGCTTCTCAGTTGTATCTTCCTCTCGTAATAATTTGAGATTACTTG
AAACGATCGAGGTGTAAACAATTATCTAGATTTAATAATATGTAGAGTATTTTTTTTCAT
ACAAAATCAAATGCTTCCAAAAAGAAAAGAAAAACTTGTTAAAAGATTTGCAGATGTACA
AAGAAGAAAACAAAGAAGGAAAATTGGAGAAGGAACTAGAAAAGTCTGGTGTTGTAGGAG
GCACAAGAAGAACACTTGTGATAGAGCCAATGGTAAGGAGCATTCCCCTTTCTTCCACAG
TCATTACAC
GenBank Accession HG968788 [GenBank]
Graphic View Graphic view of gene At1g18900
Predicted Position of Insertion Chr1:6532371 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F14D16
Hit Gene Code At1g18900 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pentatricopeptide repeat (PPR) superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL758203 [GenBank] AL758204 [GenBank]


Last Updated on 10.06.2021 13:37