SimpleSearch - Line and FST details


Line specific information

 
Line ID 156F07
Vector Used pAC161
Line Availability available as T3 set from NASC (N414947)
Segregation Analysis 50:48:41
Confirmed for Hit At2g24560
Parent of DUPLO pair none
Parent of pair(s) 3844, 79220, 79418, 79494, 79497, 79506

Gene hit At2g00790

 
Sequence (A. th genome BLAST matches underlined) 
>54-K013240-022-156-F07-8409
TTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATTGCCTGATGGA
AATCAAAAAAGGCCAATATGGCTACAGAACATCAATTACCGAACTTGAATTTGATGGCCA
ATTGAATCGCCAAAGATAAGAATCGCTGGAAATAGTGGTTGCGATGTAGCGTTTGTGGCT
GCGTCGCAGGACGAGAGTAGTGCTGCTATGAAGAGAGTGAAGGTTATGGTCTTAGAAGTC
GACATTAGTTTGATTTGTATTGTGTCTACTGCCTATGGGATCCTCCTATATAGTGAANNN
NNNNTCNNNNTNNNNNNTCCNCTTNCTTATGTTCTATCCATACTGTCTATGCGTCTCCTC
TTATTAAGANCCATNTCATACATGTGCTCTATGCTACCTGGACACAAAATANTTCAACTG
ACATTGTATAAATCGTATGAGAAACTAAACAAATTAAGTTATGTCGGATGTTTTACCTCT
TTCTCCCATCTTCTCAAAATTACGACAGAATTCAATATCCCTCCTGCCATAGATAAGACC
TTTTTAAGCCACAATCAACAAATTATCAACCAAGTAACAACACTTTATAAACACTA
GenBank Accession AL758214 [GenBank]
Graphic View Graphic view of gene At2g00790
Predicted Position of Insertion Chr2:10435236 - go to primer design
BLAST e Value 5e-96
Hit Clone Code (BAC ID) F25P17
Hit Gene Code At2g00790 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation novel transcribed region
Insertion Classification TS2TE
Confirmation Status unknown

Gene hit At2g24560

 
Sequence (A. th genome BLAST matches underlined) 
>54-K013211-022-156-F07-8409
TTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATAGCCTGATGGA
GATCAAAAAAGGCCAATATGGCTACAGAACATCAATTGCCGACACTTGAATTTGATGGCC
AATTGAATCGCCAAAGATAAGAATCGCTGGAAATAGTGGTTGCGATGTAGCGTTTGTGGC
TGCGTCGCAGGACGAGAGTAGTGCTGCTATGAAGAGAGTGAAGGTTATGGTCTTAGAAGT
CGACATTAGTTTGATTTGTATTGTGTCTACTGTCTATCTATGGGATCC
GenBank Accession AL758213 [GenBank]
Graphic View Graphic view of gene At2g24560
Predicted Position of Insertion Chr2:10431724 - go to primer design
BLAST e Value 1e-81
Hit Clone Code (BAC ID) F25P17
Hit Gene Code At2g24560 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GDSL-like Lipase/Acylhydrolase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37