SimpleSearch - Line and FST details
Line specific information
| Line ID | 157A09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N414985) |
| Segregation Analysis | 50:37:29 |
| Confirmed for Hit | At5g48515 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 92152, 92170 |
Gene hit At5g48515
| Sequence (A. th genome BLAST matches underlined) | >65-K013241-022-157-A09-8409 NTTTGATCCATGTAGAATTTCCTGGACATGAANGCCTTTACAATTGAATATATCCTGAGA TTCAATAGTAGAGCTTAATGAAGGGATAGAAAACTGAGTTTTTCCTTCTAAAATAGATTT TGTCATGATATTTGATGTACCTATGGGATCCTCCTTATAGATGACATTTTGTAAGACATT ATTTTTTTTGTAAGACATTATTTTTTTGTAAGACATTATTTTATAATAATTTACTATATT TTTTTTCCATGTTTTATATGTCATTCTAATATAAATAATCTAAGTTTGGCCTTTGAGTTC AAGTTGACTTGATCTTGCCGAGAGAAAATGAAGAAGTTGAAGAAAATTGTGTCATGCTCT GAATATTGGTCCCTCAACGAATTTGGTTGTGACTTGTTTTCACCTATGGGATCCTCCCTA TAGTGANNNNNNNNNNNNNNNNTNNCCCTTTTTTTTTTTGTTACNGATTGTNTAATTTCC AGGGACTACACAATCGGAGAAGCGCTCCACGTTGATGAACAAGATTTTGCCTCTTGTAAT TCGAGCCTGAAGAACACTTTGATCAAACCTGTCGTTCAAACGTTAAGGCAAAGGTTTTGT CAGGGGCTCTTTTTGGAATCTTTGACTCCCATGGTAAATTTGGAAATGCATTTTGGGAAA TAATTCTCAAGACCACATCCATATAAGAAAAAACTTTATA |
| GenBank Accession | AL758264 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:19659972 - go to primer design |
| BLAST e Value | 7e-83 |
| Hit Clone Code (BAC ID) | MJE7 |
| Hit Gene Code | At5g48515 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Putative membrane lipoprotein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At1g53510
| Sequence (A. th genome BLAST matches underlined) | >65-K013213-022-157-A09-8409 NTGATCCATGGTAGATTTCCCGGACTATGAAGCCTTTACAATTGAATATATCCTGTAGAT TGCTAATTTATAGCCATTTACAAGTGGACATGTAGATTTTCCAAAAAGGTCGTCCACAGA CCACAGTGGGAGAAAACCAATATTTACTTTACCCTCAAATGTTGTCTAAAACTACGAAAC TGCCACTATCTGGGATTTGTCACACCCGTACGCAATAAGTACCACGAGAAATTGCTATGG GATCCTCCTATTAGTG |
| GenBank Accession | AL758263 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:19974584 - go to primer design |
| BLAST e Value | 2e-74 |
| Hit Clone Code (BAC ID) | T3F20 |
| Hit Gene Code | At1g53510 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | mitogen-activated protein kinase 18 |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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