SimpleSearch - Line and FST details
Line specific information
| Line ID | 157C09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N415009) |
| Segregation Analysis | 50:37:31 |
| Confirmed for Hit | At1g11220 |
| Parent of DUPLO pair | 2773 |
| Parent of pair(s) | none |
Gene hit At1g11220
| Sequence (A. th genome BLAST matches underlined) | >67-K013241-022-157-C09-8409 TGATCCATGTAGATTTCCCGGATGACGTCATTCACATAACGGCTATATTTTATTTGAATT TTCACGCTATATCGACGACAATGACCGATTATAACCGGTTTAAACCGAAATAAACCGTAG AGGGGTAAATAGGTAGTATGACTGAGCTACGAAAAACTTACTCCGCCCGCGTCGATCCAC AACCTATCGCGCAAGATGTCGATGCCACTGAACCACATCTACACCTTGGTCACACTCTGG ACAGTGCTAGCTGATGAAGGACTATCAACGACGCACGCTCGTCCTACCCATAGAATCCTC ATTATTGTGCTTAACGCCCGAGGCGATGCAATGCCTGTCTTGAAGAAAGCCGAGACCTTC CTGTACGAGACTAATTATAGACAGTCGTCTCCGACGGTGACGTCACCGGTGAAGATGAAG AAGGAGATGTCTCCGAGTAGGGAGGAGCTGAATCGAAGAGTACAAGCGTTTATCAAGAAG TGTAAGGAAGAGAGATTGGAGTCGCTAAAATTGGAGAAATAAGTGGCTTAATTAAACACG AGATTAATTAGCTGTTTGTCCTAATAATTAATTGTTAATCGGTTTTTACTATTTAAATGG CTTTTATATTTGGCTTTTTTTTATATGGGCCTACAGTAATGAAGCCAAAAAGAGATTTGA ACCCATATCCTTCTAATTAGTTTAAAAAAGGACCTTTTTGATTATTTAAAAATAAAAAAA AGGGTCTCCTTCAATATCTTAATTAGAAATGATCTCATTCCCTTAAAATTTGGTTTACCT AAAGA |
| GenBank Accession | AL758290 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:3760485 - go to primer design |
| BLAST e Value | 1e-124 |
| Hit Clone Code (BAC ID) | T28P6 |
| Hit Gene Code | At1g11220 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | cotton fiber, putative (DUF761) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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