SimpleSearch - Line and FST details
Line specific information
| Line ID | 157D10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N415022) |
| Segregation Analysis | 100:89:85 |
| Confirmed for Hit | At3g22200 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit K18L3
| Sequence (A. th genome BLAST matches underlined) | >76-K013241-022-157-D10-8409 NTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGGAAAT ACACATTTCCGTCATACTCTTCTATCATACCTTTAGGATTAATGAGAAAAACACTTCAAA TTAAAGGTGTTATATGATCTCTAAGTCATATGGGGGTTATCAATTTTATGTTGTATACAC TTATTATGCAAGACTGTATACCATTGTTAGACGATAATATCTTCTGGTGACTCTCTCTCT CAAATGAAACGAGTATAACGACCTGTCGCCCCCCTAGGGAACTCCTACCTATTACTGACG AAAACTCTTGGCCTTATGCCACTATGGGACCCTCCCTATAGTGAAAAGATTAGGTTATTT ACAAGGTGTGTGGTTAATATTTTGTCACAAAAGAGTTAGGCTGAAGTATTAGTCTTGATA TGAAGATTTCTTAACATCTAAATAAGCCAAAGGAGTTTTTTTTTAGTCATAGCCATACTC CTGTATTTTGCCTCATTATTACTGTTACTTACAATGTCTTGTGACTTCTATGTGATTAAT GGAATTCCAAGAAAAACACATATTCCCGAAGTACATCTTCTTGAGTCAATGCAAGTGCCC CAATCTGCACCAGTAAAANCATTCAAGCAAAAATCTTGTGAAGCAGAATATAAAAAACCT TGGCCCTGGATTGTTCTTGAGGTACTTCAAGATTTAATGAGCAGCTTGGAGGTGTCCGTC CATCACATGGGGAAAAATAAAAATGGACTTAAGCGATTGACTACCAAAGTT |
| GenBank Accession | AL758306 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:15081187 - go to primer design |
| BLAST e Value | 6e-179 |
| Hit Clone Code (BAC ID) | K18L3 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At3g22200
| Sequence (A. th genome BLAST matches underlined) | >76-K013213-022-157-D10-8409 TTGATCCATGTAGATTNTCCCGGNACATGAAGCCTTTACAATTGAATATATCCATTTACA TGGGGAAGGCTGGAACAACAAACTAACTTTGTTAGGGAAAAGAAGGAATCTTTAGCACTT CTATGGGATCCTCCTNATAGTGAGCCATTTCACACAGTATCAGTATCTGGTATTATACCC TTTGAATGGCTCGCTCACGCGATACGGAAGACGACTTCTCAACCTGATTAGCCTAGAATT AAGAGGATCTAATGATCAAAGAATGACCAGAACCTGTAAACTTCTATAGTGACTTACGAA AATTCTTGTCTTTATGCT |
| GenBank Accession | AL758305 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:7837017 - go to primer design |
| BLAST e Value | 7e-49 |
| Hit Clone Code (BAC ID) | MKA23 |
| Hit Gene Code | At3g22200 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |