SimpleSearch - Line and FST details
Line specific information
Line ID | 157D10 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N415022) |
Segregation Analysis | 100:89:85 |
Confirmed for Hit | At3g22200 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit K18L3
Sequence (A. th genome BLAST matches underlined) | >76-K013241-022-157-D10-8409 NTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGGAAAT ACACATTTCCGTCATACTCTTCTATCATACCTTTAGGATTAATGAGAAAAACACTTCAAA TTAAAGGTGTTATATGATCTCTAAGTCATATGGGGGTTATCAATTTTATGTTGTATACAC TTATTATGCAAGACTGTATACCATTGTTAGACGATAATATCTTCTGGTGACTCTCTCTCT CAAATGAAACGAGTATAACGACCTGTCGCCCCCCTAGGGAACTCCTACCTATTACTGACG AAAACTCTTGGCCTTATGCCACTATGGGACCCTCCCTATAGTGAAAAGATTAGGTTATTT ACAAGGTGTGTGGTTAATATTTTGTCACAAAAGAGTTAGGCTGAAGTATTAGTCTTGATA TGAAGATTTCTTAACATCTAAATAAGCCAAAGGAGTTTTTTTTTAGTCATAGCCATACTC CTGTATTTTGCCTCATTATTACTGTTACTTACAATGTCTTGTGACTTCTATGTGATTAAT GGAATTCCAAGAAAAACACATATTCCCGAAGTACATCTTCTTGAGTCAATGCAAGTGCCC CAATCTGCACCAGTAAAANCATTCAAGCAAAAATCTTGTGAAGCAGAATATAAAAAACCT TGGCCCTGGATTGTTCTTGAGGTACTTCAAGATTTAATGAGCAGCTTGGAGGTGTCCGTC CATCACATGGGGAAAAATAAAAATGGACTTAAGCGATTGACTACCAAAGTT |
GenBank Accession | AL758306 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:15081187 - go to primer design |
BLAST e Value | 6e-179 |
Hit Clone Code (BAC ID) | K18L3 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Gene hit At3g22200
Sequence (A. th genome BLAST matches underlined) | >76-K013213-022-157-D10-8409 TTGATCCATGTAGATTNTCCCGGNACATGAAGCCTTTACAATTGAATATATCCATTTACA TGGGGAAGGCTGGAACAACAAACTAACTTTGTTAGGGAAAAGAAGGAATCTTTAGCACTT CTATGGGATCCTCCTNATAGTGAGCCATTTCACACAGTATCAGTATCTGGTATTATACCC TTTGAATGGCTCGCTCACGCGATACGGAAGACGACTTCTCAACCTGATTAGCCTAGAATT AAGAGGATCTAATGATCAAAGAATGACCAGAACCTGTAAACTTCTATAGTGACTTACGAA AATTCTTGTCTTTATGCT |
GenBank Accession | AL758305 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:7837017 - go to primer design |
BLAST e Value | 7e-49 |
Hit Clone Code (BAC ID) | MKA23 |
Hit Gene Code | At3g22200 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |