SimpleSearch - Line and FST details


Line specific information

 
Line ID 157H01
Vector Used pAC161
Line Availability available as T3 set from NASC (N415061)
Segregation Analysis 50:41:17
Confirmed for Hit At5g43750
Parent of DUPLO pair none
Parent of pair(s) 12747

Gene hit At5g43750

 
Sequence (A. th genome BLAST matches underlined) 
>08-K013241-022-157-H01-8409
NTTTGATCCATGTAGACTTGCCCGGACACTGAAGCGCTTTACAATCGCAAACAATTCTTT
GGAAAGCTATGATTATATAAACTCTCGTAATCTATACGCATTTGCAACAGTCTATAAGTC
TCGAGTAGACAAAGCGGGACTTCAGAAGAGGCTTGGTTCCATGTAGTGACGATGCAGGCG
CATGAGTACATACCTATGTGACCTCTATCTATCGGCCGGATTTGCCGCATTTTACGACAT
TGACGATCTGATCAGAAACCCTATGGGATCCTCCCTAATAGTGNAGACCCGGGCAAACCG
AATAAAAGAAACATTTTAATTCTTATTCCAAAAATATTTTTTATGCTATAACCGGAGTCC
GAACCGATCCAAACCGAATTTCAATTCGGGTCTATTCGGGGAAATTTTTAAAAAACCGAT
TTTCCACCAAACCGAATAACCCGACCCAAATAACCCATTTTACCCGAACTCCCAGGCCTA
TGGGATCCTC
GenBank Accession AL758351 [GenBank]
Graphic View Graphic view of gene At5g43750
Predicted Position of Insertion Chr5:17580876 - go to primer design
BLAST e Value 3e-20
Hit Clone Code (BAC ID) MQD19
Hit Gene Code At5g43750 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAD(P)H dehydrogenase 18
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g27565

 
Sequence (A. th genome BLAST matches underlined) 
>08-K013241-022-157-H01-8409
NTTTGATCCATGTAGACTTGCCCGGACACTGAAGCGCTTTACAATCGCAAACAATTCTTT
GGAAAGCTATGATTATATAAACTCTCGTAATCTATACGCATTTGCAACAGTCTATAAGTC
TCGAGTAGACAAAGCGGGACTTCAGAAGAGGCTTGGTTCCATGTAGTGACGATGCAGGCG
CATGAGTACATACCTATGTGACCTCTATCTATCGGCCGGATTTGCCGCATTTTACGACAT
TGACGATCTGATCAGAAACCCTATGGGATCCTCCCTAATAGTGNAGACCCGGGCAAACCG
AATAAAAGAAACATTTTAATTCTTATTCCAAAAATATTTTTTATGCTATAACCGGAGTCC
GAACCGATCCAAACCGAATTTCAATTCGGGTCTATTCGGGGAAATTTTTAAAAAACCGAT
TTTCCACCAAACCGAATAACCCGACCCAAATAACCCATTTTACCCGAACTCCCAGGCCTA
TGGGATCCTC
GenBank Accession AL758351 [GenBank]
Graphic View Graphic view of gene At1g27565
Predicted Position of Insertion Chr1:9574924 - go to primer design
BLAST e Value 1e-62
Hit Clone Code (BAC ID) T17H3
Hit Gene Code At1g27565 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37