SimpleSearch - Line and FST details


Line specific information

 
Line ID 158F08
Vector Used pAC161
Line Availability available as T3 set from NASC (N415140)
Segregation Analysis 50:31:27
Confirmed for Hit At2g24020
Parent of DUPLO pair none
Parent of pair(s) 1677

Gene hit MRN17

 
Sequence (A. th genome BLAST matches underlined) 
>62-K013215-022-158-F08-8409
TTGATCCTGTAGATTTCCCGACTGAAGCCTTACAATTGAATATTCCTGAAAAATAGTTAT
TTACGTCGTTTGTACTTAACAGATCTATACCATGAAAAAAACTATATTATTCTAACTATA
TACACTATATGAATTTCATGTGTAATTTTTTTTTTTTAAAACCCAGGGGGGCTTGGGGA
GenBank Accession FR804717 [GenBank]
Graphic View Graphic view of sequence FR804717 of line 158F08
Predicted Position of Insertion Chr5:7646802 - go to primer design
BLAST e Value 0.001
Hit Clone Code (BAC ID) MRN17
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At2g24020

 
Sequence (A. th genome BLAST matches underlined) 
>62-K013242-022-158-F08-8409
TTGATCCATGTAGCATTTCCGGACATGAANGCACTTACACTCGTACAACGTCAGGAGCTC
CTATCAGCTATCGCATCCATCCCTATAGTGAGCTTTCTTCACAGTCTCATACATATTCTG
CATATTACCAAATATTCCTGCCTATGGGATCCTCCCTATAGTGA
GenBank Accession AL758438 [GenBank]
Graphic View Graphic view of gene At2g24020
Predicted Position of Insertion Chr2:10218623 - go to primer design
BLAST e Value 3e-23
Hit Clone Code (BAC ID) T29E15
Hit Gene Code At2g24020 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Putative BCR, YbaB family COG0718
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37