SimpleSearch - Line and FST details


Line specific information

 
Line ID 159C08
Vector Used pAC161
Line Availability available as T3 set from NASC (N415200)
Segregation Analysis 50:50:49
Confirmed for Hit At2g19650
Parent of DUPLO pair none
Parent of pair(s) 87434, 87436, 87440, 87441, 87442

Gene hit At2g19650

 
Sequence (A. th genome BLAST matches underlined) 
>59-K012549-022-159-C08-8409
TTGATCCATGGTAGATTTCCCGGACATTGAAGCCTTTACAGTTGATTATCTCCACTGTCA
ACCGATTTCTTGCTATGAATACTAAGGAGTTAAGGTGACATGCACGGTGCGCTACAGGTT
ACAGAGCCTTTTGAGCACAAATGCCTTACACATCCTTTACACTACTCTACTGATCACTCC
TAACGTTGCACTGAGTGCGATGGGTACTGGAAATAGAGTTGCGACGATTGTGAATAATGG
TCTGTAGCTTCGAGAGTGCTATTTTACCGCAAAAGGGATTGATGCTTAGCGACGACGATC
ATCCTCTCTTATTATCTTATAGCGAGAGGGGCGTGGTTGGCAAATATTGGTGTGTAACAT
GCGAAGCAACTGAGAACCCTGAGAAATGGCTCTATTCTTCGCTGGAGAGTGGGAGTACAA
TTGATATTTTCCTGCGTTAACTGAACTAACGCATATGCCATGCCTAGAGCGTTACCATGG
ATAGGAACATTTGTATCCAACCGCTCTATTCGTTGACCACTTTGCTAGCGTGTGCATGTC
TCGATGCACGCTTCCTTTTGTTCGTACTCTTGCCGAGGACGGAGCTGATCATCTTTTTNG
GTCTTTAAAAAGGGGAAAANGAAAATTATCAGGAACGTTTCGAATTTTAAAATATGTTCT
TTACTATGGTTAGAAAACTATTTATTTATAGATGATAATGTTTGCTA
GenBank Accession FR804731 [GenBank]
Graphic View Graphic view of gene At2g19650
Predicted Position of Insertion Chr2:8494239 - go to primer design
BLAST e Value 4e-115
Hit Clone Code (BAC ID) F3P11
Hit Gene Code At2g19650 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cysteine/Histidine-rich C1 domain family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37