SimpleSearch - Line and FST details


Line specific information

 
Line ID 160E10
Vector Used pAC161
Line Availability available as T3 set from NASC (N415322)
Segregation Analysis 50:18:10
Confirmed for Hit At1g48640
Parent of DUPLO pair none
Parent of pair(s) 4553, 4605, 4613, 4700, 9988, 88275, 88276

Gene hit At1g48640

 
Sequence (A. th genome BLAST matches underlined) 
>77-K013243-022-160-E10-8409
NTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATCTCCTGATGCA
GGATATATTGGCTGGGTAAACCTTAAAGAACAGAGCGATCATTATATTAATCGGATATTC
GAAAGGGCGTGACAAGGCCGATCCGGACGGCCATTCGCTTGTGCATGCCAACGACATGGT
TCCCATTAGCAGTGCTTGGCCTCCCGTGCGATATTGACTCCTGTTCAACCACCCCAACAG
GCTAAAGCCTGTCTACTGTATAGATTTCCAAACACGATTCTGTCGGGTAGTCTGGGTACC
GCATTGAAGACCATAGGGCTGCTGTGTGCTCGCTACTTCGACACTGACTATAGCACGAAC
GCAACGCCGAATAATCCTCAATCGCTAATACCACGTCTGTCCACTAGCGTGATCCGATTG
TTGGATCTTTACGCCGATCCTCTGGACNATCATCAACGCGCCCCAGATACCGGCATGATG
ATCCCGGCGCAAGTCGCTGAATCTCGCCTTACACACGGTACTGAGGCGGGACCTGCATTA
ATCAATTCTATACGCTCGAGATATCGTTGAGCACATTAGTAATCGTGGAGCACAAGTCTA
CATCTTCAATTATGTGGTAACACGAATCTATGATATTGAAGCTGATGATGCAGACTCTAT
ATATGACATGCCGACGTACTTACCAAGATAAA
GenBank Accession FR804751 [GenBank]
Graphic View Graphic view of gene At1g48640
Predicted Position of Insertion Chr1:17988905 - go to primer design
BLAST e Value 3e-08
Hit Clone Code (BAC ID) F11I4
Hit Gene Code At1g48640 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transmembrane amino acid transporter family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37