SimpleSearch - Line and FST details


Line specific information

 
Line ID 165E10
Vector Used pAC161
Line Availability available as T3 set from NASC (N415802)
Segregation Analysis 50:48:35
Confirmed for Hit At5g08600
Parent of DUPLO pair 1471
Parent of pair(s) none

Gene hit At5g08600

 
Sequence (A. th genome BLAST matches underlined) 
>77-K013365-022-165-E10-8409
GTGATCCATGTAGATTTCCCTGACATGAAGCACTTTACAATTGAATATATTCAAAGGGAG
AGAATGAAAGAACCATAATGACTAACCGGAGAACGTACCTCGGCTTCCATAATGGTTTCA
GTGTTCCTATGGGATCCTCCCTATAGTGATCCCCCAATAGTTACCCGCCATTTGCCTGAG
ATGGGCTTATTTGTGTACCTTAGTCGCACCCCTATCTGTTCCCACCTACCTTAACGACCC
TGGCTATCCTTATCTCACACTATTTTTTTACTACGATCTCCCCCGATGGCCTTTATATCG
GCGGGGGCGTGGCTCTCTATGCCACCCCTTATTTATCCACTATCTAAGAAGTACATGGAC
AGATACCTCGGCTATGCACAACAAAGAGGTTCCCCGTTATTACCCTTTTTATGAAAAGTC
TCAATCGTCCCTTTGGACTTATGAAACTGTATCTAAAACTCTTTTGAAGGAGACCTGCGT
GTCCCGCTCCACCATGTCCACGAAGATCCTCTTCTTGCCCTTTAATTCCAACAAACTCTC
TCTTCCCCGTTCCCCACTCTTTACGGCGA
GenBank Accession AL759091 [GenBank]
Graphic View Graphic view of gene At5g08600
Predicted Position of Insertion Chr5:2788519 - go to primer design
BLAST e Value 2e-30
Hit Clone Code (BAC ID) MAH20
Hit Gene Code At5g08600 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation U3 ribonucleoprotein (Utp) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL759090 [GenBank]


Last Updated on 10.06.2021 13:37