SimpleSearch - Line and FST details


Line specific information

 
Line ID 168E04
Vector Used pAC161
Line Availability available as T3 set from NASC (N416084)
Segregation Analysis 100:97:64
Confirmed for Hit At2g05920
Parent of DUPLO pair none
Parent of pair(s) 675, 5454, 5461, 5542, 5567, 5608

Gene hit At2g05920

 
Sequence (A. th genome BLAST matches underlined) 
>29-K013368-022-168-E04-8409
TGATCCATGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCCGGACAGAA
GCTCGGTTTCAAAGTGACGGTTAATGGAGCTCCTATGGGATCCTCCCTATAGTGAANGNN
NNNNNANNNNACATNATCCNCNTATTTTTAATTACCAATTCAATTGTCCCCTCCCATTTC
TTATACAAACCAACCNCAATCTACCCCGCCCCAATCATCATATCCCCACATCACACATCA
TATATTCACGCCAGATTTTTTTTTTTCTCACCTAAAATCCTCCCACTTTCACCCTTACCA
CTAAATGCGGAGTCATCACATATCCCCCCCTATTTCACTACTCCCACCCCCTATCATAAT
AACTCACCTTAATATACACCACCCAAAATACCACCTTATAATCCCCCCCCTCCTTCCCCT
CATCTCATATTATTCAAATCAATCTAATCCAATTTCCTATCTATTTATCCACAAAACCAA
CCCCACCGCATAAACCGATAATTACAATCCCCTCACCTCCTTTCTTATTCCCATTCCCCA
CACATCTATATACACACCTCCCTCTCACCCCAATTATATACTCCATTCTTAATCCTCCAC
TATACAATCATAATCTCCCCCTAATCCACCATACCCCACTTTTCCCACACTTTCACTATC
ATAAATTCACACCCACATTACCAATAAATCACTAATCCCCACTCTCCTAACTCTACCACC
ACCCCCCCCACATTCACCTCTAACATCCACCAAATACACACTACACATACACGTATACAC
AAA
GenBank Accession BX649759 [GenBank]
Graphic View Graphic view of gene At2g05920
Predicted Position of Insertion Chr2:2270059 - go to primer design
BLAST e Value 1e-07
Hit Clone Code (BAC ID) T6P5
Hit Gene Code At2g05920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Subtilase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37