SimpleSearch - Line and FST details


Line specific information

 
Line ID 171B04
Vector Used pAC161
Line Availability available as T3 set from NASC (N416336)
Segregation Analysis 50:44:29
Confirmed for Hit At1g47990
Parent of DUPLO pair none
Parent of pair(s) 95882

Gene hit At1g47990

 
Sequence (A. th genome BLAST matches underlined) 
>26-K013466-022-171-B04-8409
NTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATACTCTTGGCATAT
TACTTTTTTTTTTTTATTACTCAAAGACACTGATTGGTCAAAAACATTGGCTGTTCCAGA
CGAACTGATCGGTCTGCGTGATATAGATATCACTGTCTGAACGGATTTTCTATCCACGGC
TATCTGATAACCTACTGAAACTGTGAGGTGGGACATGAAGTCCCTCAGCCGTCATATCTA
ATATCTCACGAGCCAACTGCTTAACTGCTTCTATGTAACAATTCACTGCCGAGCTGTCAA
ACATATACGTCACACATCAGCACGAGATTCATTTATTTTTGGTTACTTATAGAAATATAC
GAAATATATCCACGTAACCTTAATATTTCTACTTTCAGAAAGAAGTTGGGTTTTTTTCTA
TCAAAGAAAAAAAAAGATT
GenBank Accession AL770401 [GenBank]
Graphic View Graphic view of gene At1g47990
Predicted Position of Insertion Chr1:17700134 - go to primer design
BLAST e Value 4e-118
Hit Clone Code (BAC ID) T2J15
Hit Gene Code At1g47990 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation gibberellin 2-oxidase 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL770401 [GenBank]


Last Updated on 10.06.2021 13:37