SimpleSearch - Line and FST details


Line specific information

 
Line ID 171D05
Vector Used pAC161
Line Availability available as T3 set from NASC (N416361)
Segregation Analysis 50:46:29
Confirmed for Hit At1g54270
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g54270

 
Sequence (A. th genome BLAST matches underlined) 
>36-K013466-022-171-D05-8409
TTGATCCATGTAGATTTCCCTGACATGAAGCACTTTACAATTGAATATATCCATCGGACA
TGGTCACAAACACAGAGACATCATCAATGATGAGAGTTCAGGTCTGGCTCGTCTCGAGTA
CTAGATACAACCGATCTCTTGGCTCGTGGTATCGATGTGCACCAAGTCTCCCTATGGGAT
CCTCCCTATAGTGAGACGATAATGACTTCTGTTCACCCACCCAAACGTAGGAAAGCCTGA
CTACGGAGCAGCATTCCAAAAAGATTCCTTGGCTCGTCTGGGTCAACTATGAGATCCTCC
GTATAGTGTGGATTATTTACACCTCTCACCAACCCCCCCTTCTCTAAGTGTTGGGAGTAA
CCGGTTTTATAAAGCGGAAAACCGAATAAAAACCCCACAGTCTCGACATCTCTCGGTAAT
CCCTGAAAAAAACGCGGAACAATAATCCCGCCACACACATATCCCCCCCCTCATCTTACC
GACGCCTGAGGAGCACTCCACCCGCAATAAAAATAGCGAAAATAACTAGATGCACATCGC
ACAAACCAACCCCGCCCGTCTCCCGTGCCCCCGTTTCACAGTAAACACCCCCCGTTCCTT
TTTTCTTCCATCCCCCCATTAAATGCTTCCCACGTCGCCCGAGACGTGTTCTTCAATCAA
ACACCGATATTTCGTTTTACCCCCGTTTGTCCCCGAAGCGCGCCCACCCCACATGATATA
TCATCGCCCAAACCACAAACAACACCGGATACAATGAAAAAGAGTCGTACCCAAAGGTAC
TATTACTTATCCTCCCCCATCCCAAAACGATTAAAAGGAA
GenBank Accession AL770432 [GenBank]
Graphic View Graphic view of gene At1g54270
Predicted Position of Insertion Chr1:20261713 - go to primer design
BLAST e Value 2e-24
Hit Clone Code (BAC ID) F20D21
Hit Gene Code At1g54270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation eif4a-2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37