SimpleSearch - Line and FST details


Line specific information

 
Line ID 172F11
Vector Used pAC161
Line Availability available as T3 set from NASC (N416487)
Segregation Analysis 100:97:91
Confirmed for Hit At2g47000
Parent of DUPLO pair none
Parent of pair(s) 1438, 6332, 6350, 10611, 84142, 84155, 84169, 84180, 84208, 84223, 84224, 84225, 84226, 84227, 84228

Gene hit At2g47000

 
Sequence (A. th genome BLAST matches underlined) 
>86-K013469-022-172-F11-8409
NTGATCCCTGTNGAATTTCCCGGACATGAAGCACTTTACATTTGAATATATCCTGATAAC
AGAGTCCAAGGGGGGTATACCATAGTCAACAACGCGTGCTCCACACGTAGAAACTGGCGG
CGTGAGAAGACAAGAGGACGAAGAAAGATATTCCGAAACCAATACCACTGACTCTGCCTT
GACGAATCCAATTCTTAATTGGACCTTAACATTTCTTTGAGTACATGTTCATCAACATGT
CTTCTGCACAGAAAGAAGCAACGGGTCTTATGCTCCCTACCGCGGAATTCGCTACTTGGA
TTGCTTGCCCGTACATTTTCTGCCATTGATTTAAAGTAACGTTAATCAAAAGATAGAGAG
AATCTATGGGATCCTCCATAAAAGAAGCGCAGANCTTGCCAATGGAACCCGAGGAGGCTG
TCGCATATTACCCTCTGTTGCTGAGTCTGAATAGACCTTTG
GenBank Accession AL770570 [GenBank]
Graphic View Graphic view of gene At2g47000
Predicted Position of Insertion Chr2:19311190 - go to primer design
BLAST e Value 2e-98
Hit Clone Code (BAC ID) F14M4
Hit Gene Code At2g47000 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ATP binding cassette subfamily B4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR805007 [GenBank]


Last Updated on 10.06.2021 13:37