SimpleSearch - Line and FST details


Line specific information

 
Line ID 172G01
Vector Used pAC161
Line Availability available as T3 set from NASC (N416489)
Segregation Analysis 50:43:36
Confirmed for Hit At5g06660
Parent of DUPLO pair none
Parent of pair(s) 1089

Gene hit At5g06660

 
Sequence (A. th genome BLAST matches underlined) 
>07-K013458-022-172-G01-8409
ACCTGATCCATGTAAATCTTCCCAGTACATGAAGCCTTTACACTTGAATATATCATGAGT
CATAGAGGATTGAAAGGCGATGATTCCACTGATTGTTCCATGGCTTTTCTTTATCTGCTT
TGTTCTATTACGTATAAGGACTAATCTGCAGAAGTTCTTGGGTTTCTCTCCACCTATGGG
ATCCTCCCTATAGTGAACNACANCTNCTACTTCTCCTCTTTTTTTTCCGNCAACTAATCC
AACCTCACCTCCTCCTTCTTCTCCTTTACCTCCCTTCCTTCCTCCTCCATCTCCTACTGA
ATCTCTAACTACTACTTTCACACAACCTTCCCCCCACCCTCCAATCACTCCTTAAACACC
GTTATTCCATCACACCCCATAACCCTCTCAATCCCCCCCCCTCCTAACCAACGACCACCT
AACACTTTCTCACTTATCACCTCCTACGTCATTTTTCCCTAAACTTTCTTT
GenBank Accession AL770572 [GenBank]
Graphic View Graphic view of gene At5g06660
Predicted Position of Insertion Chr5:2047277 - go to primer design
BLAST e Value 8e-58
Hit Clone Code (BAC ID) F15M7
Hit Gene Code At5g06660 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane/coiled-coil protein (Protein of unknown function DUF106, transmembrane)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37