SimpleSearch - Line and FST details
Line specific information
| Line ID | 174B09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N416629) |
| Segregation Analysis | 50:36:35 |
| Confirmed for Hit | At2g41370 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At2g41370
| Sequence (A. th genome BLAST matches underlined) | >66-K013531-022-174-B09-8409 CTGATCCCATGTAGATTTCCCGNACATGAAGCCATTACCACAAGAGATCTCCCTCTGTGC GATCCTACACATATACAGATTTTATAGCACTAGCGCGTATGCGCTCCTTACCTATAGTGA TTAACTTTGCCATCGATTAATATCTTATCTTTATACCCTAATTTCTTCCTATGGGATCCT CCCTATAGTGANNNNNNNNNNNNNNNNNNNNNNNNNNN |
| GenBank Accession | AL770722 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:17237839 - go to primer design |
| BLAST e Value | 5e-22 |
| Hit Clone Code (BAC ID) | F13H10 |
| Hit Gene Code | At2g41370 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Ankyrin repeat family protein / BTB/POZ domain-containing protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit K7L4
| Sequence (A. th genome BLAST matches underlined) | >66-K013516-022-174-B09-8409 TTGATCCATGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTTAATCTA TCTAGTGTTTTGTATATATAACTACTCGTGCACATATCCCTATACCACCTAAAAATCAAA AGAGTGCTTTGGGATCATCCCTATAGTGATGATATAGGGGATCCTTCTTACAATGAGGTG AACGTGAAATATTANATTTGTTTGACAACAAACTTATTATTGATTAATTAGAAGCATTTG AAAACAATATGGGGCAATAAATCTAATCATGTTAGTGAGTTAGACAAATTTTTTCACAAC CATCTCAAATTATGTCAAAGTAATGGGTCAATGGTTATGCTTTGTCAGCATTTATGATCC CATAACTTAAGTAAATTATCTATTGAATGCAAGAAATAAGGTTTATCTATGGGATCCTCC CTATAGTGAGNNNNCNCNNNNNNNGGGGGGGCGGCCGCGGCGGTCCGCGGCGGCCCGCGC GGCGGCCGCGTTTCCGCACCGAGCCGCCCCCCCCCGAAAGATAAAAATAACGACGAAACA AAAACAAGTGATGTAAACGCGCGGTAGGACCGCGCGGAGCTAGACGAGGGGCTGTGGGGT AGCGAGGTCTTTCGGGTTTTTTTCCATAGTCGGTGCAGGCGCGGCGTGATTTTTTTCGTC GTATATTGCGCCGCCAGCTCCGGATAGCGCGATACGAAAGCGCGGGAAAAAGCGCCCGTC GGATAATTTACGCGGTGTTGTTATTTTTCGGCCGCGCCCGAATAACTGGGCGCGCGGGAA GTCGCGTGGCGTAAATATGTTAATCAAAGTGAGTCGCCCACGCGCCCTTTTACGCCCGAC CTTTGCGCCAAGAACGGGAGATATTACGATATAACCCGCCCGCACGGCCCGCTGGAAGCT TTGCGGGCGGCGCGACGCACGCCGCCCCGTAATATTCGCGAATGAATAATGAGATTATCT |
| GenBank Accession | AL770721 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:5163781 - go to primer design |
| BLAST e Value | 4e-115 |
| Hit Clone Code (BAC ID) | K7L4 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
