SimpleSearch - Line and FST details


Line specific information

 
Line ID 174D05
Vector Used pAC161
Line Availability available as T3 set from NASC (N416649)
Segregation Analysis 50:45:39
Confirmed for Hit At4g21490
Parent of DUPLO pair none
Parent of pair(s) 3834, 9856, 9862

Gene hit At4g21490

 
Sequence (A. th genome BLAST matches underlined) 
>36-K013531-022-174-D05-8409
CTGATCCATGTAGATTNTCCCGGNACATGAAGCCTTTACATTTGTGTCATGATGGAGCGT
ATTGTCACTGCTCCGACACGACACCACCGCGTTCACATAGGTTTAGCAAACCTCGCTGTA
GCGTCGATACGGGTGTATGAACTCTAGCCGTAAACTCTGGATCGAAGAATGAAGACACTA
ACGCGGAGCCGATGAGAGAATATTCCTGCCCCCAGATACATGTCTGAAAGATCATGAGCA
CGTCTATCTGCCTTTTCTCGCTGATAGCTGTATGCGGGACGGATCCTCACTATAGAGGCA
AATCCATCATATAGCAACAATGGTGTTGAAACTAAAACCAGGAAGAGAAAAGTAGTGCTG
CTCGGAACTGGATGGGCTGGAGCAAGTTTTTTGAAGACTTTGAATAACTCTTCTTATGAG
GTTCAGGTTATATCTCCTCGAAACTACTTTGCTTTCACTCCCTTGTTACCTATGGGATCC
TCC
GenBank Accession AL770746 [GenBank]
Graphic View Graphic view of gene At4g21490
Predicted Position of Insertion Chr4:11439115 - go to primer design
BLAST e Value 5e-96
Hit Clone Code (BAC ID) F18E5
Hit Gene Code At4g21490 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAD(P)H dehydrogenase B3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit F3K23

 
Sequence (A. th genome BLAST matches underlined) 
>36-K013516-022-174-D05-8409
CTGATCCATGGTAGATTTCCCGACATGAANGCCTTTACATGCGTGCATGATCGACTCTAT
GGGATCCTCCCTATACGAGAGACACCTTGTTCGACTATGTCTATCAAATCTATCTTCGTT
GTGATGCTGGTACTAAAAACCAGAACCGTAAACTCTGGCGCGTCGATATAAAAACAACAA
ACCTGAGATCCAATCTGGAGATATTGCTGCCCCCATTTACATTTCTGCACGATCATCAGT
ACGTTTCTCTGCCTTTTCTCTCTGTTTTCTTATGGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL770745 [GenBank]
Graphic View Graphic view of sequence AL770745 of line 174D05
Predicted Position of Insertion Chr2:9213140 - go to primer design
BLAST e Value 3e-57
Hit Clone Code (BAC ID) F3K23
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37