SimpleSearch - Line and FST details


Line specific information

 
Line ID 177B09
Vector Used pAC161
Line Availability available as T3 set from NASC (N416917)
Segregation Analysis 50:42:42
Confirmed for Hit At3g51150
Parent of DUPLO pair 2684
Parent of pair(s) none

Gene hit At4g27040

 
Sequence (A. th genome BLAST matches underlined) 
>66-K013534-022-177-B09-8409
CTGATCCATGGTAGATTTCCCGGNACATGAAGCCTGTACGTGAGATTGTGAAGGCTACGC
ACGATAATTAGTTGTACTTGGAGAGCAGAGTTGACATCAGATACATCTGACTTACAGCCC
ATTAGCGCACAGGACACATAAGGACTCATGCCTATTGCTGTATTAAGCATCTAATGTTTG
CTTCTTTTTACTTACTGAATTATGTGACTATGGGATCCTCCCTACACGGAAGAGAAATTC
AAAGATCATAGACCGGTGAATGATGCGACGACGACCAGGAATTGTAGGATTACAAAAGGC
CGCTAGCTGCTATATGATGC
GenBank Accession AL771081 [GenBank]
Graphic View Graphic view of gene At4g27040
Predicted Position of Insertion Chr4:13574780 - go to primer design
BLAST e Value 2e-24
Hit Clone Code (BAC ID) F10M23
Hit Gene Code At4g27040 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation EAP30/Vps36 family protein
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At3g51150

 
Sequence (A. th genome BLAST matches underlined) 
>66-K013519-022-177-B09-8409
GTGATCCATGGTAGATTTCCCGGACCATGAAGCCTTTACAATTGAATATGATGGTTAAGC
AGCTATATCATTGTCTTTGATAGTTGAGTTCCGGCTGAAACATAGGACTTTCGCCCATGA
CATCGCCAGTTTACCAAGCTATTATCAGATTGCTGTTATTAAGCATCTAATGTTTGCTTC
TTTTTACATTACTGAATTATGTGGCTTTGGGATCCTCCCTATACGTGAGAAGAAATTCAA
AGATCAGAAAACGGTGAAAGATGCGACGACGACCAGGAATTGGAGGATTACAAAAGGCCG
CAGCTGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL771080 [GenBank]
Graphic View Graphic view of gene At3g51150
Predicted Position of Insertion Chr3:19003530 - go to primer design
BLAST e Value 2e-46
Hit Clone Code (BAC ID) F24M12
Hit Gene Code At3g51150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ATP binding microtubule motor family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37