SimpleSearch - Line and FST details


Line specific information

 
Line ID 177D11
Vector Used pAC161
Line Availability available as T3 set from NASC (N416943)
Segregation Analysis 100:100:93
Confirmed for Hit At4g03070
Parent of DUPLO pair none
Parent of pair(s) 1480, 8276, 90565, 90573

Gene hit At4g03070

 
Sequence (A. th genome BLAST matches underlined) 
>84-K013534-022-177-D11-8409
NTGATCCATGTAGATTNTCCCGGGACATGAAGCCTTTACAATTGAATATCTTGTCTTGGT
AGCTCTACTTACTATACTGTGTGAGAAGGACTAATTGCAATCTTATCGAATCACATCTTG
CACAGACACATCAACATCATTAATACTTTACACGATACTGTATAGTATATGTCAGGACCG
GTTTCGAGCGGGCACTGACTCTAGCCCTATGGGATTCTCCATATGAGTGACTTCATGTTG
TTGTGTTGTAGTTTTAACATTCCAAAAACCAAATCTATGTTTGAAGAAATATAAATCATC
TCTCACTAAAGAGTTTTTTAGAAGAAAAGCAAAAAAATAGTACTATACCATTCTCACTCT
CTGGTGGTATAGTGGATTATATTACACATGTGCGGCAGAGTATATGAACACTGCAAATTT
TGAAACATAAAATCTTACTATACTTGTATAAAGTTGTACCAAAATCCAATATTGGTTGAC
TTCATGAGTTGCAGGCAGAAACCGGGAATGCAATCAGATTCAGATGTATGCAAGCGAGCT
TCTGTCAAAATCTGGTTGTGGCCTGCCTCGTGTTGGAGTCCGCGGTCTCTGGATATTCAG
CTCCTGCAAAAGATAAATTGTGTACTTTCAGCGCCTCTGGTTCGTAGCCCAAAAAGATGT
AGCTACATAAACTCTCCTA
GenBank Accession AL771116 [GenBank]
Graphic View Graphic view of gene At4g03070
Predicted Position of Insertion Chr4:1359474 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T4I9
Hit Gene Code At4g03070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37