SimpleSearch - Line and FST details


Line specific information

 
Line ID 177E02
Vector Used pAC161
Line Availability available as T3 set from NASC (N416946)
Segregation Analysis 50:44:38
Confirmed for Hit At5g25160
Parent of DUPLO pair none
Parent of pair(s) 11454

Gene hit At5g25160

 
Sequence (A. th genome BLAST matches underlined) 
>13-K013519-022-177-E02-8409
CTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGTTTTTGATATCTCAAT
CTTGATATGGATGAGGAAACTATTGAAGCGTCCATGAGAGCTAAAAAGGGATAGATTTTT
TCAGGAGATGATTTTTTTCTTTCTCTTTCTCTGTCTCTTTCTATCAATAATAGCTATGAG
AAGAGGTTTATATCAGTGAATGGGAGCAGAAGTAGATGGTATTAGAAAGGAATAGACAAA
GGAAACAAAGACCCTACGCTATGGGATCCTCCCTTAAGGNGGAGANNANNNGCANNGNNG
GCNATTGNNTGACCCTCCTTNCTTTGACACTATTTGCACGAACCACCTATCCATAGCCAC
TGTATTGGCATTCGGGGGGGTGCCCGGAGGGCACCGTTAGCCGAAGAGGCTCACTGGCCC
TTCGGTCTGCTGAAACGGCTTCTTTGATATTTGGGGAGCAGACACTCGTTTCGTGCTCCA
CCAGGAGGACAAAGATGTGTTTCGCGCCATTGTGTCGACAGAGACTCTGTTCGAACCGTT
CGGCAGTCTNAACCGCGAGTTC
GenBank Accession AL771117 [GenBank]
Graphic View Graphic view of gene At5g25160
Predicted Position of Insertion Chr5:8687560 - go to primer design
BLAST e Value 2e-46
Hit Clone Code (BAC ID) T11H3
Hit Gene Code At5g25160 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation zinc finger protein 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37