SimpleSearch - Line and FST details


Line specific information

 
Line ID 178B09
Vector Used pAC161
Line Availability available as T3 set from NASC (N417013)
Segregation Analysis 50:46:44
Confirmed for Hit At1g35540
Parent of DUPLO pair none
Parent of pair(s) 89235, 89248, 89254, 89258, 89262, 89265, 89268

Gene hit At1g35540

 
Sequence (A. th genome BLAST matches underlined) 
>66-K013562-022-178-B09-8409
NTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCGAGGAGG
TTTCCGGATATTACCCTTTGTTGAAAAGTCTCAATTGCCCTTTGGTCTTGTGAGACTGTA
TCTTTGATATTTTTGGAGTAGACAAGCGTGTCGTGCTCCACCATGTTGACGAAGATTTTC
TTCTTGTCATTGAGTCGTAAGAGACTCTGTATGAACTGTTCGCCAGTCTTTACGGCGAGT
TCTGTTAGGTCCTCTATTTGAATCTTTGACTCCATGGGAATTGGGGATCCTCTATGGGAT
CCTCCCTTTAGCGAGGGNTATCAAAAGCATGCTTTGCAAAAGCAATTATCCCATGTCTCA
TACTTTCTATTGATACTATGGATGAAGGTATATTCCCTTGTTGATGTCCTGCTCGTCTGA
TACCAACTCGTAACTCTCCAGTCTCTCCCCTAAAACCACAAGTATATAGTTTAAAGTCCA
AAACTCAGGACCACAAGGATATATTAGAAGAACCAATATTATCCCTAACGAATCCAATAA
CATCTCCTTCAAACCATTTTTTGGAGGTGGGGAAGGCATTCCAACCAATGGTTAACAAAT
GGTTTTCGCGCTGGACCTACCTGGAATTAGAA
GenBank Accession AL771192 [GenBank]
Graphic View Graphic view of gene At1g35540
Predicted Position of Insertion Chr1:13110109 - go to primer design
BLAST e Value 1e-124
Hit Clone Code (BAC ID) F15O4
Hit Gene Code At1g35540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation auxin response factor 14
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR805096 [GenBank]


Last Updated on 10.06.2021 13:37